KEGG   Neodiprion lecontei (redheaded pine sawfly): 107227284
Entry
107227284         CDS       T09006                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107227284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nlo03400]
    107227284
DNA repair and recombination proteins [BR:nlo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107227284
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_RIG_2nd PEP5_VPS11_N Beta-prop_Vps41 WD_LRWD1 RAWUL WDR54 Beta-prop_DCAF4 WD40_RFWD3 WD40_like Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 107227284
NCBI-ProteinID: XP_046597706
LinkDB
Position
5:complement(15295683..15799255)
AA seq 683 aa
MAAHKTGGQSARKKVQVSMVIRDEVERKHRAGVNSLQYDPVSHRLYSAGRDSIIRIWNCK
NIKEPYIQSMEHHTDWVNDIVSCCGGKNLISASSDTTVKVWNAHKGFCMSTLRTHKDYVK
ALAYAKDREQVASAGLDRAIFLWDVNTLTALTASNNTVTTSSLTGNKDSIYSLAMNPSGT
VIVSGSTEKVLRVWDPRSCAKLMKLRGHADNIKALVLNKDGTQCLSASSDGTIKLWSLGQ
QWCIQTFRVHTEGVWALLATDTFSHVISGGRDRKVIMTELRATEKCTVICEENAPILKMA
MTPDQTSLWVATSESTINNWTITQKDWQCGDYCEDAMGNGGGLRTMGPRNSDPAQKIIGG
AAVRHCHVLNDRRHVLTRDTEENVALYDVLKAVKVVDLGRVDFEQEVKKRNKTVYVPNWF
NVDLKTGMLTIHLGQDENDCFSAWVSAKETNLADNDAVDQKVNYGNLLLQALLEHWWRPL
HGDDENEGNVNDGNGPTHTRGGNPYFSVPGHTPVIFSEVGGRTLYRLLVRDAAGETEGVL
LNETVPPWVVDIVVDKNLPKFIKIPFYLLPHSTSGVKSLKKDRLIANDFIQVRKVAEHVY
DKVLGAGSDSGSVTGAGNTVSGGSPAGDRTNADSNTDNTSLAEEKVELLCNDQVLDPSMD
LRTVRHFIWKSSADLTLHYRPIK
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggcagcacacaagacaggcggccaaagcgcccggaagaaagtccaggtgtctatggta
attagagacgaagttgaacgtaagcatagagctggcgtaaactcactgcagtatgatcca
gtatcgcacagactctattcggcaggaagagacagtataattcgaatatggaactgcaaa
aatataaaagaaccgtacatccagtcaatggaacatcatactgactgggtgaacgacatt
gtgtcgtgttgcggtggaaagaatttgatatcagctagttcggacacaacagtcaaagtt
tggaatgctcacaaaggcttttgtatgtctacattgcgtacgcataaagattatgtgaaa
gcgcttgcttatgccaaggacagagaacaggtggccagtgccggattggacagagcaata
ttcctatgggatgtcaacactctcactgctctcactgctagcaacaatacagtaaccaca
tcctcgttaactggaaataaggactctatttacagcctggcgatgaatccttctgggact
gtgatagtcagtggcagtaccgagaaagtgttgcgtgtctgggatcccaggtcatgtgca
aaattgatgaagctcagggggcatgcggataatattaaagctttggtgttaaacaaagat
ggtactcaatgtctctctgcaagctcagacggtaccataaaattatggtctcttggccaa
cagtggtgcatacaaactttcagggtacacacggaaggcgtttgggctttactagccacg
gatacattcagtcatgtgatatctggaggaagagatagaaaagtaataatgacagagctg
agagcaactgagaaatgtactgttatatgtgaggaaaatgctccgatccttaaaatggct
atgacgcccgatcagaccagcttgtgggtagcaacaagtgaatctaccataaataattgg
acaattactcaaaaagactggcagtgtggtgactattgcgaagacgcaatggggaacgga
ggtggtttgaggactatgggaccacgtaactcggaccctgcacaaaaaattataggtggt
gctgcagttaggcattgtcatgtattaaatgacagaagacacgttttgactcgggacact
gaggagaatgtggcgctttatgatgtcttgaaagctgtcaaagtcgttgatcttggacga
gtagactttgagcaggaagtgaagaagagaaataagactgtatatgtccctaactggttc
aatgtcgacctcaaaaccgggatgctgacaatacacttgggccaggacgaaaatgactgt
ttttctgcatgggtgtctgcaaaagaaacgaacttggctgacaacgatgctgttgaccaa
aaagtaaactatggaaatctactacttcaagcacttctggagcactggtggaggccgtta
catggtgatgatgaaaatgaaggaaatgttaatgacggaaatggtccaacgcatacgaga
ggagggaatccatatttctcagtacctggacatacgcctgttatcttcagtgaggtcggt
ggcaggactctgtacagattgctcgttcgcgatgcagctggagaaacggaaggcgttctt
ctaaatgagactgtccctccctgggtggtggacatcgttgtggataaaaatctaccgaaa
tttattaaaattcccttctaccttttgccacactccacctctggggtgaagagtttgaaa
aaggatcgcctgattgccaatgactttatacaggtacgcaaagttgccgaacacgtctat
gataaggtattgggggctggaagtgattcaggttcagttactggtgctggaaatacggta
tcaggtggatctccagctggagatagaacgaacgctgactcaaacacggataacacatcg
ttggcagaagagaaagttgagttgctctgcaatgaccaggttttggatccatctatggac
ttgagaacggtgagacatttcatatggaagagttctgccgatttaacactccattatcga
ccaatcaaatag

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