Neodiprion lecontei (redheaded pine sawfly): 107227316
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Entry
107227316 CDS
T09006
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
107227316
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
107227316
Condensin II
107227316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107227316
NCBI-ProteinID:
XP_046596347
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Position
5:complement(4337886..4344904)
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AA seq
1372 aa
AA seq
DB search
MAGRNQCNSDYSDEEMETEPSDNGGVDSDDEGGVRIDADIYIPPPPKPMSEVDENGPRIM
ITKIVNNNFKSYAGKQVIGPFHKCFSAIIGPNGSGKSNVIDSMLFVFGYRASKIRSKKIS
VLIHNSSEHPNCSSCTVAVHFQTIIDKPGHEYDIVPNSEIVISRTAFKDNSSFYQLNGRK
VQFKEVAKVLRECGVDLDYNRFLILQGEVEQIAMMKPKGQTSNDTGMLEFLEDIIGTVRY
KEPLEKLSQKIELLTENRVEHLNRLQVVEKEKEELEEPMQHAVRYLKCENKIAQLQHQLY
HCKRLRAQDECTQQELKKTEMDKDYQKLVDEMSLVKTQKNEKQAEMKEKCKKWDALQNRK
DQLTAKYEEIKKKDEQLHAELVETNKRRKANMATVKTEKEKLESLSKVPEKNAKDIAECE
GLHERCIADREKAEATLATLMNGLKKKTEPLLEQRRLLETELMSLRKNVDQARGNLEIAQ
SSLRLYTSAEVAEKAKLEELQESLKNTNDLLRQRKEQIKVFDTKIPATEQSLVEAQREFD
MVKQRDISATAQLRNTRIRVEEQRSAMNASKSRNRVLDSLMQQKRQGNIPGIRGRLGDLG
AIDSKYDVAISTACGPLDNILVDTVDTAQRCIAFLRQNDIGRATFIALEKQQRLWSECRE
RIATPENVPRLFDLIRVEDEEVLPAFYYGLRNTLVARDLDQATRIAYGEQRHRVVTLKGE
LIETSGTMSGGGRTSLQGRMGQSIVRAEPCAADVEKLQVDLDKIYEECNQLKDRQHQLEP
QIDSLSRSLVDMKMDREKYSIEVQSLTKQKPSLESQLKIQEKKAAESVSNPNEVKKMTKA
VKSAEKELEEAENDSKSTENEVVKINQQIEEIAGGKVKSQQKSIADLSKKIDKARGEICR
LQVAIKTAERDSKKVAQHIETLETSVRTCENKIREIQQEKVCFETNAKELLGSLNEVTEE
LVERDENLATFKAELNAFQERENKMKAVKIELDQQVKEMNKVLESLQQKIPEYTRKISSL
KLQPIPGETVLEFEEIPEEEVRQLDPKMVAELIEKTKARLPAEIPNMQLIKEYFEKDALY
VRRVKELEEITIHRNKLRDIFEDSRRRRTHEFLTGFLIITSKLKEMYQMITLGGDAELEL
VDSLDPFNEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDA
ALDFKNVSIVGNYIKERTKNAQFIVISLRSNMFELADYLVGIYKTYNCTKCAILDVGKYC
DANNIHLPTPNLNKDYYSSSQGSRPYSQSILSKQNTNTNENRPTIIPESSSSSSSGSSVI
DSELSRVYRLPELGLCPSPKTSITTVRDRRSTEIEGSTGGAHGEPSSKRRKL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggccggtagaaaccaatgcaacagcgattactccgacgaagagatggagacggagccc
tcggataacggaggtgttgacagcgacgacgagggcggggttagaatagacgctgatatc
tatatacctccaccgccaaagccgatgagcgaggtggacgaaaatgggcctagaataatg
ataacgaagatagttaataataatttcaaaagttacgccggcaaacaagtaattggacca
tttcacaagtgtttctcagcgataatcggacccaatggcagtggcaaaagtaatgtaatt
gattcgatgttgttcgtttttgggtacagagcgagcaagatacggtccaaaaagatatcc
gtacttattcataactcgagtgaacatccgaattgctcgagctgtactgtggctgtacat
tttcaaacaataatcgataagccaggacatgaatacgacattgttcccaacagtgaaatt
gttatatctaggacagcatttaaagataattcatctttttatcaactaaacgggagaaaa
gtgcaatttaaagaagttgctaaagtgctaagagaatgcggtgttgatctagactacaat
cgattcctaattcttcagggcgaagtggaacaaatagcaatgatgaaaccaaaaggccag
acgagtaatgatacgggtatgcttgagttcttggaagacattattggtacggtacggtac
aaagagccattggaaaaattatcacaaaaaattgagttattgactgaaaatagagttgaa
catctcaatcgactgcaggtcgtggagaaggaaaaagaagagctcgaagagcccatgcaa
catgccgtgcgatatttgaaatgcgaaaataagattgcacaacttcagcatcaattgtac
cattgcaaaagattacgtgctcaagacgaatgtactcaacaagaattaaagaagacggaa
atggacaaggattatcagaagctcgtggatgaaatgagtctagtcaaaacgcagaagaat
gaaaagcaagcagaaatgaaagaaaaatgtaaaaaatgggatgccttgcaaaacagaaag
gaccagttgactgcaaagtatgaagaaatcaaaaaaaaggatgaacaattgcatgcagaa
ttggtggaaactaataagaggcggaaggccaacatggcaacagttaaaacggagaaagaa
aaacttgaaagtttgagcaaagtgccagaaaagaatgccaaggatatcgcagagtgtgag
ggattgcatgagcgctgtatagctgatcgtgaaaaggcggaagcaaccctggcaacactt
atgaatggtcttaaaaagaaaactgaaccgctgttggaacagcgaagattgttggaaacg
gaattgatgtcgctgagaaagaatgttgatcaagcaagaggcaatctggaaattgctcag
tctagtcttcggttgtacacgtcggcagaagtagctgagaaagcgaagctggaggaattg
caggaatcgttaaaaaatacaaatgacttattacggcaaagaaaggaacaaataaaagtg
tttgacactaagataccagctacggaacaaagcttggtggaagctcagagagagtttgac
atggttaaacaacgagacatatcagcgacggctcaattgagaaatacgagaattcgagtt
gaagaacaaagatcagccatgaatgccagcaagtctagaaacagggtgttggattctctc
atgcaacagaagagacagggcaatatccctggaattaggggcaggctgggtgatctcggt
gccatagatagcaagtatgacgtagccatttcaacagcatgcggtccattagacaacatt
cttgtggatacggtcgatactgctcaacgttgcatagcatttctgcggcaaaatgatatc
gggcgggcgacgttcattgctctggaaaagcagcaacggttgtggtccgaatgcagagaa
aggatagcgacgccagaaaatgttcctaggctttttgatcttatcagggtcgaggacgag
gaagttctcccagcattttattacggtctaagaaacaccttagtcgctcgtgatctggac
caagctacaagaattgcttacggcgagcaaagacatagagtcgtcaccttgaagggagag
ctaattgagacgtcaggaacaatgagtggtggtgggcgtacctctctgcaaggtagaatg
gggcaaagtattgttagggctgaaccatgtgcagctgatgttgaaaagctgcaagttgat
ctcgataaaatttatgaggagtgcaaccaactcaaggatcgacaacaccagcttgaacca
caaattgactcgctatccagatcactggttgatatgaaaatggacagagagaaatactca
attgaagtacagtctctgacaaaacagaaaccatctttagagtcgcagctgaagattcaa
gaaaaaaaagctgcagagagcgtatcaaatccaaatgaggtaaagaaaatgaccaaagca
gtgaaatctgctgaaaaagaacttgaagaagcagagaatgattcaaagtcgacagaaaat
gaagtagttaaaataaatcaacaaatagaagaaatagctggaggcaaagtaaaaagccaa
caaaaaagtatcgctgatttgtcgaaaaaaatcgataaggctaggggagaaatatgtagg
ctgcaagttgccattaaaactgctgaaagagattcaaaaaaagtggcacagcacattgaa
acgttagaaaccagcgttcgtacctgtgaaaataaaattcgtgaaatacagcaagaaaaa
gtttgtttcgagacgaacgctaaggagctcttagggtctttgaacgaagtgacggaggaa
ctggtggaaagagacgaaaatttggcaactttcaaagcagagttgaatgcttttcaagaa
cgcgagaataaaatgaaagctgttaaaattgagctagaccagcaagtcaaagagatgaat
aaagttcttgaatcgcttcaacagaaaattcctgaatatacgagaaagatttcctcatta
aaactccaacctattcctggtgaaactgtactggagtttgaggaaatcccagaggaagaa
gtccgtcaattggatcctaaaatggttgccgagctaatagagaaaacaaaagcaaggctc
ccagcagaaattccgaacatgcaattgattaaagaatatttcgaaaaagatgctctctat
gtgcgtcgtgtcaaggagttggaagaaattacaattcacagaaacaagctgcgggatata
tttgaggacagcaggcgtcgtagaactcacgaatttcttactggttttttgattattaca
agtaaattgaaagagatgtatcagatgatcactcttggaggtgacgctgagctagaactg
gtcgattctttggatccttttaacgagggaattgttttcagtgttaggccgccgaaaaag
tcgtggaaaaatatcagcaatctcagcggaggtgaaaaaactctcagctctttggctcta
gtttttgcattacatcattacaagcctacgccattatatttcatggacgagatagatgca
gctttggatttcaaaaatgtgtctattgttggtaattacataaaagaacgaacaaaaaat
gctcaatttatagtcatttccctgcgatccaacatgtttgaactggctgactatttggtt
gggatatacaaaacttataattgcacaaagtgcgctatacttgatgtaggaaaatattgt
gatgcgaacaacatccacttgccaacaccgaacctaaacaaagattactacagctcttca
cagggatcaaggccgtacagtcagtcaatattgtcgaaacagaacacaaatactaatgaa
aatcggcccaccatcatccctgagtcatcctcaagctcaagctcgggctcttctgtcata
gattcggaattaagtcgtgtttacagacttccagaattagggttgtgtccttcgccaaaa
acatcgataacaactgttcgtgacaggagatctacagaaattgaaggtagtacaggtggg
gcgcatggagaaccaagcagtaaacgacgtaaattatga
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