Neodiprion lecontei (redheaded pine sawfly): 107227385
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Entry
107227385 CDS
T09006
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04620
Toll-like receptor signaling pathway
nlo04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107227385
04624 Toll and Imd signaling pathway
107227385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nlo03000
]
107227385
Transcription factors [BR:
nlo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107227385
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank
Ank_2
RHD_dimer
Ank_4
Ank_3
Ank_5
RRM_9
DUF5623
Motif
Other DBs
NCBI-GeneID:
107227385
NCBI-ProteinID:
XP_015523996
UniProt:
A0A6J0C9F5
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Position
1:complement(2030866..2037220)
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AA seq
882 aa
AA seq
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MPQVYENLDVFQNYNQQEDQIYPFPDVMMNNLSLLSPSNSSLDSQMTSSTPSPMSISQSP
NHTMSYYTLSNVTGTMLEDRYIKIIEQPVDKFRFRYKSEMMGTHGSLAGANSSNSRKKQA
PTVELKNYPGSAVIRCTLVTADPDRRGPHAHRLVRRVGNSDEDDPHEQKVSPEQGFTVSF
HGMGIIHTAKKHIKDELVKKKRITALEEAKRKNVNVTSLTIRDEATIKMEAEAAQKWMSL
NSVALCFQAFTPNANGVLCPITEPVYSNPINNLKSALTGELKICRIDKTAGSCDGNEEVF
MLVEKVGKKNIVIKFFEMDENNVEIWSALGHFTELDVHHQYAIVFRTPPYKDKDITEPKE
VFIKLCRPTDGESSDPLQFTYKPNNRIGRKRPRMSCESTELQTPIAINLMQSDEGTSIFN
VNNSSEINKLLSEHCTSNEFREYSENLDLEEYINLLPKEVNDNEELRLDGPLKKKETASF
AENIVKQIRIILQKNDPNGKERILALLKERTVYGDSPLHSALRHGQMNLVKYILMLLAKY
PDFKQIVDSQTSSGRTCLHYAVEQNQPAVTKALLLIGADASACDDHGFSPLHKAVKIPEA
GHCVDALLEGGSISVETRDDTGWTALHLAAEAGSLHAVKSLVKAGVDVNSTDMSYGRTAL
HIAVEGGHKEIVEFLLEKTTIDVNKRNFSGNTALHSAVVNTGERAEELCKLLLNHGANPS
IPNNNRDSSKELQTTTIKDEAISDDEDAQESGQTSFDLASNKPEILQLLSATNTIIKQEI
EDVPEESDGTLLDEKAMTLLVPILDESKAWEKIVTSLGYDFLQSSLETSGPVSPSRMLLN
YLDIQAEVSIKKLRTLLVELNETKAVDIIDEMILRRNTSSTK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagtttacgaaaacttggacgtcttccagaactataatcaacaggaggatcag
atttatccgtttcctgatgttatgatgaataatctcagcctgttgagtccgagcaacagc
tcactggattcacaaatgaccagcagcactccgtcaccgatgtcgatatcacaatcgcca
aaccacacaatgtcatactatacactgagtaatgtaactggcacgatgttggaagaccgg
tatataaaaattattgaacaaccagtagacaagtttcggttccgatacaaatcagagatg
atgggaacccacgggagtcttgctggcgccaacagctcaaacagccgcaagaagcaagca
cctactgttgagctgaaaaattatccaggcagcgccgtcattcgctgtacgcttgtaaca
gcagatccagatcgtaggggaccacatgctcatcgtctggtacgccgtgttggaaattca
gacgaagatgatccgcacgagcaaaaggtttcacccgaacaaggttttacagtctcgttc
cacggaatggggatcatccacactgctaaaaagcacataaaagatgagcttgttaaaaag
aaaagaattacggctttagaagaagcaaaacgcaaaaatgttaatgtcacatcgttgacc
atccgcgatgaagcaacgattaaaatggaagcagaagctgctcaaaaatggatgagtctg
aacagtgtcgcattatgctttcaagcatttaccccaaatgccaatggcgtactttgtccc
atcacagaaccagtgtattcgaacccgattaataatctcaaaagtgcccttacgggagag
ctcaagatatgtagaatcgacaaaactgcaggatcttgtgatggtaacgaggaagttttc
atgctggtagaaaaagtgggaaaaaaaaacatcgtaatcaaattctttgaaatggatgaa
aacaatgtagaaatttggagcgctttaggccacttcacagagttagatgttcatcatcaa
tacgcgatagtgtttcgaacgccaccgtataaagacaaagatataactgaaccaaaagag
gtttttataaagttatgcagaccgactgacggagagtctagcgatccattacagttcact
tataaacccaataaccgcatcggtagaaagagaccgcgcatgtcttgcgaaagtactgaa
ttacaaactcctatcgcaatcaatctcatgcaatcggatgaaggcacatccattttcaac
gtaaataattcaagtgaaatcaacaaattgttgagtgagcattgtacatcaaacgagttt
cgggaatactctgaaaatctggacttagaagagtacatcaatttactgccaaaggaagta
aatgataatgaagaactgagattagatgggcctttgaaaaaaaaagaaacggcttcgttt
gcggagaatattgtaaaacaaattcgaattatacttcagaaaaatgatccaaatggaaag
gaacgcatactagcgttgctcaaagagcgcacagtctatggagattctcctctccattcc
gcgctaagacacggacaaatgaatttagttaaatatattctaatgttacttgcaaagtac
ccggatttcaagcaaattgtcgactctcaaacaagttctggccgtacatgcttacattac
gccgtagaacaaaaccaacctgcagtaacaaaggctctgctcttgattggggcggatgca
agcgcgtgcgatgatcacggtttttcaccgcttcacaaggcggtcaaaatcccagaggcg
ggtcactgtgtggacgcactattagaaggaggaagtataagcgtcgaaacacgagatgat
actggctggaccgctcttcatctggctgctgaagccggatcgctacacgctgtcaagtct
cttgtcaaagctggcgttgatgttaacagtaccgatatgtcttacgggcgtacagcactc
cacatcgccgtcgaaggtggccacaaagaaatcgttgaattcctgttagaaaagacgaca
atcgacgtaaataagcggaatttcagtggaaacaccgcgctgcacagtgctgtcgtcaac
accggcgaacgagctgaggagctctgcaagcttctgttgaatcacggggcgaatccctcg
atacctaataataatcgcgattcgtcgaaagagttgcaaacaacaactataaaagatgaa
gcgatatccgatgatgaagatgcccaggaaagtggtcaaacgtcgtttgacctcgcatca
aacaaacctgagattttacaattgctttctgcgactaatacgataataaaacaagaaatc
gaggacgtacccgaggaaagtgacggtactttgctggacgaaaaagctatgactcttcta
gttcccatactcgacgaatcgaaggcatgggaaaaaatcgtcacatctttgggatatgat
tttctgcagtcttcgctcgaaacttcaggccccgtcagtccatcgcggatgttattaaac
tacttagacatacaagctgaagtttcgatcaaaaaattacgaacgttattggttgaatta
aatgaaactaaagctgttgatataatcgatgagatgattttgcgacggaatacatcaagt
acaaaatga
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