Neodiprion lecontei (redheaded pine sawfly): 107227735
Help
Entry
107227735 CDS
T09006
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107227735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlo03041
]
107227735
Spliceosome [BR:
nlo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
107227735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
107227735
NCBI-ProteinID:
XP_015524442
UniProt:
A0A6J0CCX0
LinkDB
All DBs
Position
1:4206699..4210538
Genome browser
AA seq
507 aa
AA seq
DB search
MMASRKQGSKLKRKLVEHGSDSDDDNDAQQKTYRSNSEAPRLCPYLDTINRQFLDFDFEK
LCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIV
DSSLDDIKYVLNPTFDKWQISQLDKSDKLSRAIDGSMYSPGIVGMNNIKANDYCNVILQA
LSHVTPLRDFFLREYNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQA
VVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKKDSSIIYKTFLGHMRIYTRKIPP
LELEESQRSELLNTLEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKF
NAVAEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGD
ILTPEVKARHPYTTYDLVANIVHDGEPGQGTYRVHVLHRGTGQWYEMQDLHVTQILPQMI
TLTEAYIQIYELRREAGFETEGFQTAK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtccaggaaacagggaagtaaactaaagaggaaattagtggaacacggcagt
gattcggacgacgataacgatgcgcagcaaaaaacctatagatcgaactcagaggctcca
cgtctgtgcccttacctcgatacgatcaatcgtcaattcttggattttgattttgagaaa
ttgtgttctgtgtctctttccagaatcaacgtttacgcttgtttagtttgtggtaaatat
ttccaaggtagaggcactaacactcacgcctatactcatagcgtcgctgaaagtcatcat
gtatttcttaatcttcacacgcttaaattttattgtttaccggacaactatgaaattgtc
gattcatcccttgacgacataaagtacgttctaaatcctacttttgataaatggcaaatt
tctcagttggacaaaagtgacaaattatccagagctatagatggctcgatgtattcaccc
ggaatagtcggaatgaacaacattaaggcaaatgattactgcaacgtcattttgcaggct
ttgtctcacgttactccattgcgagatttcttcctgagagaatataattactcccatgtg
aaacgaccgccaggagattcgtcttaccttctagtccagaggttcggagagttgatgaga
aagttatggaatcccagaaatttcaaggctcatgtcagcccgcatgaaatgcttcaagct
gttgtattgtggagcaaaaaaagattccaattcacagaacaaggtgatccggtggatttt
ctgtcctggtttctcaacgcgttgcatctggcgctaaatgggacgaaaaaaaaagactct
agcattatatacaaaacgtttcttggccacatgcggatttatacacggaaaataccgcca
ctagaactggaagagagtcaacgaagtgagcttctgaatacactcgagtatggagaaacc
gtaactgaaagccctttcttgtacctgacttgcgatctgcccccacctccgctcttcaag
gaccaatttacggaaaatatcattcctcaggtgaatttgtatacattactaaacaagttt
aatgcagtagccgaaaaagagtataaaacgtacaaggaaaatttcatgaagagatttgaa
atcaccgaactaccaccttatcttattttgtacatcaagagatttacgaagaatactttc
ttcgtcgagaagaatcccaccatcgttaattttcccgtcaaaaatgtagatttcggtgat
atcctcacgccggaagttaaggctagacacccgtacacgacgtacgacttggtagcgaac
atagttcacgacggtgagcccggtcaaggaacgtacagagttcacgttttgcacagaggg
acaggccagtggtacgagatgcaggatttacacgtgacgcaaatattaccgcaaatgatt
acgttgactgaagcttacattcagatctatgaattacggagagaagctggcttcgaaacc
gaaggattccagacagcgaaataa
DBGET
integrated database retrieval system
