Neodiprion lecontei (redheaded pine sawfly): 107227869
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Entry
107227869 CDS
T09006
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X2
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107227869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nlo04131
]
107227869
Membrane trafficking [BR:
nlo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107227869
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Nbl1_Borealin_N
Motif
Other DBs
NCBI-GeneID:
107227869
NCBI-ProteinID:
XP_015524625
UniProt:
A0A6J0CDZ6
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Position
3:42592608..42604192
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AA seq
831 aa
AA seq
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MMDWGWQFRSDSNPMTPTMTGVEEQEKLLEDAVGVVKVQAFQMKHCLDKSRLMDALKHAS
TMLGELRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVADLYELVQYAGNIVPR
LYLLITVGLVYIKTNPCLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDVAEG
VEQEGTVSTRERFPGMLLLQVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRERREREREE
LRILVGTNLVRLSQLETVTLDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFH
LQTLNAFLKSCAELQNGVNVKNIIISLIDRLAAFSQRSDGVGGPGSPSQLQGIPTDVKLF
DVFSDQVATIIQTRQDMPPEDIVSLQVALINLAHKCYPDRVDYIDKVLSTTVQIFQKLNI
ERLEYNSAVSRELSRLVKIPVDNYKNILTVLKLEHFAPLLEYFDYEGRKSLAVYIITNIL
DNETLIPAQEQVDAVLSMVSPLVQDQPDQPTIEEDPEDFAEEQGLLGRLIHHFKSETADQ
QYMILSAARKHFSTGGNKRIKYTLPPIVFQAYQLAFTYKSLKDQDDMWQKKCQKIFQFCH
VTITALMKAELAELPLRLFLQGAIAIGEIRFDNFETVAYEFMSQAFSIYEDEISDSKAQL
AAITLIIATFEQMSCFSEENAEPVRNQCALYASKLLKKPDQCRGVSTCSHIFWSGKSIAT
GGKEMQDGNKVLDCLKKGIRIASQCMDTSVQVQLFVELLNHYIYFYEKGNAALSVQILNQ
VIAKIREELPNLEVSEETEQIQKHLANTLEHLRNRMESPESEGPSYQGLVL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggactggggatggcagttcagatctgattctaacccaatgacaccaaccatgact
ggcgttgaggagcaagaaaaactattggaggatgccgtcggtgttgttaaggttcaggcc
tttcagatgaagcactgcctagataaatccaggctcatggatgcactaaaacatgcttcg
accatgctgggagagctccgcacctcgctgctgagtcccaagagttactatgaactgtac
atggcgataactgacgagcttcgacatctggaactttacttactagatgagtttcagaaa
gggagaaaagttgcagatctctatgagcttgttcaatatgctggaaatattgtacctaga
ttgtatctactcataacggtcggtctagtttatattaagacaaatccctgcttgaagaga
gatctactgcgtgatttagtagaaatgtgccgtggagttcagcatccattgagagggttg
tttttaagaaattatttactacaatgcacacgaaacgtgttgcctgacgtagctgaggga
gttgaacaagagggcacggtgagtacgcgagagcgtttcccaggaatgttgctgttgcag
gtacgagacagtattgactttgtgttgatgaactttgctgaaatgaataagctgtgggtc
agaatgcagcatcagggtcacagcagagacagggaaagaagagaaagggaacgcgaagag
ctacggatcctggtcggaacaaatttagtcagactcagccagttagagacggttaccctt
gacaaatacaagaagttggttttaccaggaatattagaacaggttgttagctgcagggat
gcaatcgcgcaggaatacctcatggaatgcataatccaggtgtttcctgatgaatttcac
ttacaaacgctgaatgcgtttctgaaatcatgtgccgagctgcaaaatggtgtaaatgta
aagaacatcattatttcattgattgacagactggccgctttcagtcagcgatcagatgga
gtcggtggaccaggaagcccaagtcaacttcaaggaattccaacagatgtgaaattgttc
gatgtatttagtgaccaagtggcgacgatcattcagaccaggcaagacatgccacccgaa
gacattgtgtcgctccaagtagcgctcatcaatttagcgcacaagtgttatccagacaga
gttgattacatcgacaaggttttgtcaaccacggtgcaaatattccagaagctcaatatt
gaaagattagaatacaacagtgcagtttcgagggaattatccaggctggtgaaaatacct
gtcgataactataagaacatactgaccgttttgaaactcgaacatttcgcaccacttttg
gaatacttcgattatgaaggaaggaaatcattggctgtttacataatcacgaatatcttg
gataatgaaaccctgatacctgcgcaagaacaagtcgacgctgtcctgtcaatggtttct
cctctggttcaagaccaaccagaccaaccaactattgaagaagatcccgaagattttgcc
gaagaacagggccttcttggtagactgattcatcactttaaatcggaaactgctgaccag
caatacatgattttgagtgcagcaagaaaacatttcagcactggtggaaataagagaatc
aagtacactctcccacccatcgtgtttcaagcttatcagttggcctttacctacaagagc
ctgaaagatcaagatgacatgtggcagaaaaagtgtcagaaaatctttcaattctgtcac
gtgacaatcaccgcattgatgaaagccgagcttgccgaacttccacttcggctttttctc
caaggagccattgctattggtgaaattcgctttgataacttcgaaacagtcgcctatgaa
tttatgagtcaagctttctccatttacgaagatgagattagcgattcgaaagcccagtta
gctgccattacacttataatcgcaactttcgaacaaatgagttgcttttccgaagagaat
gctgaaccagttagaaaccagtgtgcactttacgctagcaagttactgaagaagccagat
caatgcagaggggtttctacttgttcccacatattctggtctggaaagtcaattgccact
ggtggtaaagagatgcaagacgggaacaaagtactggattgcttgaaaaagggaattaga
atagcgagccagtgcatggatacgtctgtccaagttcaactttttgttgaattgcttaat
cattatatttacttttacgaaaaaggaaatgcagcgttgagcgtacaaattttgaaccaa
gtgattgccaagataagggaggaattgccaaacctcgaggttagcgaagaaacggaacag
attcaaaaacatttagcaaatactctagagcaccttcggaaccggatggagtctcccgaa
tcggaaggtccatcgtatcaaggtctcgtactgtaa
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