Neodiprion lecontei (redheaded pine sawfly): 107227942
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Entry
107227942 CDS
T09006
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Pathway
nlo03420
Nucleotide excision repair
nlo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107227942
09124 Replication and repair
03420 Nucleotide excision repair
107227942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nlo04121
]
107227942
03400 DNA repair and recombination proteins [BR:
nlo03400
]
107227942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlo04147
]
107227942
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
107227942
DNA repair and recombination proteins [BR:
nlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107227942
TCR (transcription coupled repair) factors
Cul4-CSA complex
107227942
Exosome [BR:
nlo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107227942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
HbrB
DUF2018
Motif
Other DBs
NCBI-GeneID:
107227942
NCBI-ProteinID:
XP_015524748
UniProt:
A0A6J0CDE5
LinkDB
All DBs
Position
2:13078859..13087265
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AA seq
817 aa
AA seq
DB search
MSRIGRTQLLPTAQVKRSVPTDSVVNFNHSAKRARHPNGTTGSSATAGQLEEIENMTDSA
ANTQKRANFSALTVASPNGVNKISANATNAKPGSAKKLIIKNFKNKPKLPDNYQERTWEK
LREAVVAIQTSKSIRYSLEELYQAVENMCNHKMASTLYANLTELTESHVKANIEQFLAES
MDRHIFLKKMNECWQSHCRQMIMIRSIFLYLDRTYVLQNPSISSIWDMGLHLFRLHIVLN
NLVQTRSVEGLLMLIEKERQGDTVDRTLLKSLLRMLSDLQIYQEAFEAKFLVATERLYAA
EGQRLMNEHDVPEYLAHVDKRLQEENERLLHYLDTSTKWSLIHTVEKQLLSEHITSLLQK
GLSGLLDENRTSDLSLLYNLYSRVKNGLIELCLNFNSYIKKKGRTIVIDPEKDKTMVQEL
LDFKDKMDNIVNTCFHRNEKFGNSLKEAFEAFINQRANKPAELIAKFVDCKLRAGNKEAT
EEELERLLDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGG
GFTSKLEGMFKDMELSKDINIAFKQYAGNLQNEFSASNLDLTVSILTMGYWPTYPVLEVT
LPAEMVQYQDVFNKFYLGKHSGRKLQWQPTLGHCVLKAWFNQGNKELQVSLFQALVLILF
NDTDNLSLEDIKAATNIEDGELRRTLQSLACGKARVLQKNPRGRDVADNDRFVFNAEFTN
KLFRIKINQIQMKETNEEQKATEERVYQDRQYQIDAAIVRIMKMRKTLTHNLLISELYNQ
LKFPVKPADLKKRIESLIDRDYMERDKDNANQYNYVA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatcgggagaacccaactcttgccgacagcacaggtgaaaagatcggtgccc
actgactcggtggttaatttcaaccacagtgcgaaacgcgcgaggcacccgaacgggaca
acgggaagcagcgcgacggctgggcagctcgaagagattgaaaacatgaccgactcggcg
gcgaacacccagaagagggcaaatttctcggctctgactgtcgccagtccgaatggggtt
aacaaaatatcagctaacgcaacgaacgcgaagccaggatcggcgaaaaaactgataata
aagaacttcaaaaataagcccaaacttcctgacaattaccaagagcgtacgtgggaaaag
ttgcgggaggcagtcgtcgccattcagactagcaaaagcatccggtattctttagaagaa
ttgtaccaggctgtggaaaacatgtgcaatcacaaaatggcctcgactttgtatgccaat
ttgacagagctcaccgaatcccacgtcaaggctaacatcgaacagtttttagcagagtct
atggataggcatatatttctcaaaaagatgaatgagtgttggcagtctcactgtcgacag
atgattatgataaggagcatattcttgtaccttgacagaacctatgttcttcaaaatccc
agcatctcatccatatgggatatggggctgcatttattcagacttcacatagtcttaaac
aacttggtgcagactagatctgtcgaaggattgcttatgctcatagaaaaggaacgccaa
ggggatacagtggaccggactcttctaaaatccttgctgagaatgttgtctgatctacaa
atttaccaagaagcctttgaagccaaatttttggtggctacggaaagattatatgccgca
gagggacaacggcttatgaacgaacatgacgtgcctgaatatctggctcacgttgacaaa
cgtcttcaggaagagaatgaacgactgttgcactacctcgatacatcaacaaaatggtcc
ctgatacatactgtagaaaaacaattattatcagagcacataacaagccttttacagaag
ggtcttagcggtttgttggatgaaaatagaacgagcgacttgtcgcttctctacaatttg
tacagccgtgtcaaaaatggcctgattgaactttgccttaactttaattcttacattaag
aagaagggaaggacaatagtaatcgatcctgaaaaagacaaaactatggttcaggaactg
ttagatttcaaagacaaaatggacaatatagtgaacacgtgttttcaccgaaatgagaag
tttggcaacagtttgaaggaagctttcgaagctttcataaaccaacgggcaaacaaaccg
gccgaactaatagccaaattcgtcgactgcaagctacgtgcaggaaacaaagaggcaact
gaagaggaactcgaacgattactcgacaagatcatggtgctgttccgttttattcatggt
aaagacgtgtttgaagcattctacaaaaaggatcttgccaaacgtttgctggttggaaaa
tccgcgtctgtcgatgctgaaaagtcgatgctctcaaaactgaagcaagaatgcggcggt
ggatttactagcaaacttgaaggaatgttcaaggatatggaacttagtaaagacataaat
atagccttcaaacaatacgcaggcaatctccaaaacgaattttcggctagtaatttagat
ctcacagtatctatattgacaatgggatattggccaacttatcctgtactagaagtgacc
ttacctgctgaaatggtacagtatcaagacgtgttcaacaagttttatctcggcaagcac
agtgggagaaaattacagtggcagccaacactaggacactgcgttctcaaagcgtggttc
aatcagggcaacaaagagctgcaagtgtcattgttccaagcacttgttttgatactattc
aacgacacagataatctttcccttgaagatattaaagctgcaacaaatatagaagatggt
gaacttcgaagaactctgcaatcgttggcctgtgggaaagctagagtattgcaaaagaat
cctcgaggcagagacgttgctgacaacgacaggttcgtcttcaacgcggaattcacgaat
aaactcttcagaattaagatcaaccaaatacaaatgaaagaaacgaacgaagaacaaaaa
gcgacagaggaaagagtttatcaagataggcaataccagatagacgcggccatagtcagg
attatgaaaatgcgaaaaacattgacacacaatctactcatcagtgaactttacaatcag
cttaaatttccagtcaagcctgcagacttgaagaaaagaatcgaatctttgatagataga
gattacatggagcgcgataaggataatgcgaatcagtacaactacgtagcgtaa
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