Neodiprion lecontei (redheaded pine sawfly): 107227968
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Entry
107227968 CDS
T09006
Name
(RefSeq) CDK5RAP1-like protein isoform X1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nlo03016
]
107227968
Enzymes [BR:
nlo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
107227968
Transfer RNA biogenesis [BR:
nlo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107227968
Prokaryotic type
Methylthiotransferases
107227968
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
107227968
NCBI-ProteinID:
XP_015524783
UniProt:
A0A6J0CDH8
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Position
1:24757072..24759997
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AA seq
619 aa
AA seq
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MSGLKCAIYRYGLTINRHAYCQLGTDYRRVFGCVNNHNLSKYNLQIYRTKHENASITPKL
IDDREINSITQNGKPFRTFPNLSEGPDLKDFIKSDVTVDSTEAEPVPYLKATCGNDRKVY
FSVYGCQMNVSDTEIIWSILKKTGYQKTDTMTEADVILLVTCAIRDAAEQKIWHKLVHLK
HYKKWRSLRSDKPPLKVGLLGCMAERLKHKLLETDKIVDVVAGPDSYKDLPRLLSLTEDN
QTAINVILSYDETYADVTPVRINQDSVTAFVSIMRGCDNMCTYCIVPFTRGRERSRPIAS
ILDEVSHLSDQGVKEVTLLGQNVNSYRDLSESKFATADKSDPKLAAGFKTVYKPKIGGLR
FSDLLDKVSQINPEMRIRFTSPHPKDFPDEVLQLIAERPNICRNIHLPAQSGNSTVLERM
RRGYTREAYISLVEHIREIIPDISLSSDFICGFCGETEEEFADTISLMQMVKYNMAYLFA
YSMREKTTAHRRHEDNVDPKVKQDRLRRMITIYRTEVQKLNEAMIGRQYLVLVEKKSRKS
EFNMQGRTSGNIKVIFPRGSIQDNRCTTKSRNIEAGDYVVVQIINANSQVLKGIPLYHSS
ITQYALSTGNHYERMAYNL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcggattaaagtgcgctatttaccgatacgggctcaccataaatcgccatgcttac
tgccaattaggcacggattatcggagggtttttggttgtgttaacaatcataacctctca
aaatataacctacaaatatatcgtaccaaacatgaaaatgcttcaattacaccgaaactg
atagatgatcgcgaaataaattctatcactcagaatggaaagccatttcgaacttttccc
aatctcagtgaaggtcccgatctaaaagactttattaagtcagatgttaccgtagattct
acggaggctgaacctgttccttatttaaaagcaacttgcggtaatgaccggaaagtttat
tttagtgtttacggatgtcagatgaatgtaagtgacacagaaatcatttggtcgattttg
aagaaaactggttatcaaaagactgataccatgacagaggctgatgtaattttgcttgtg
acatgtgccattcgggatgcagctgaacagaagatatggcacaaacttgttcatttgaaa
cattataaaaaatggagaagtcttcggtcagacaaaccaccactcaaagttggtttgcta
ggttgcatggcggagagattgaagcataagttactggagacggacaagatagtggatgtt
gtagcaggtcccgatagttacaaggacttacctcgattactatcccttacagaagataat
caaacagctatcaatgtgattttatcgtatgatgaaacatatgccgatgtgacaccagtt
cgaatcaatcaagattctgttactgcctttgtttcaattatgcgagggtgtgacaacatg
tgcacttactgcatagttcccttcacacgtggtagagaaaggtctcgtccaatcgctagc
attcttgatgaggtatcacatttgtccgaccaaggagtaaaagaagttactctacttggg
caaaatgttaatagttacagggatttatcagagtcaaaatttgcgactgcagataaaagt
gatcccaaattggcagcaggattcaaaactgtttacaaaccgaaaattggtggattgcga
ttcagtgatctgttagacaaagtatcacagattaacccagaaatgaggataagatttacg
tcaccccatccaaaagattttcctgacgaagtattgcagttgatagctgaacgacctaac
atctgtcgcaacatacatttacctgctcagagtggaaattcaacggttctggaaagaatg
agacgaggctatactagagaagcttacattagtttagttgagcacatacgcgaaatcata
ccagacattagtttatcgagcgattttatttgcgggttttgcggtgaaactgaagaagag
tttgcagacacaatttcactcatgcaaatggtcaaatacaatatggcttacctatttgct
tacagcatgcgggaaaaaacaaccgcgcatcgacgtcatgaggataatgttgatcccaaa
gtaaaacaagatagactccggaggatgattacaatttacagaactgaggtgcaaaaattg
aatgaggcaatgattgggcgacagtatttggtcctcgttgaaaagaagagtcgaaaatcc
gaatttaatatgcaaggtcgaaccagtgggaatataaaagtgatatttccgcgtggttca
atacaagacaatagatgtacaactaaaagccgtaatattgaagctggtgactatgttgtt
gtgcagataattaatgctaattcgcaggttctcaaagggattccgctttatcactcatca
attacgcagtatgcactcagtactggtaatcactatgaaaggatggcctataacttgtaa
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