Neodiprion lecontei (redheaded pine sawfly): 107228235
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Entry
107228235 CDS
T09006
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nlo04040
]
107228235
Ion channels [BR:
nlo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107228235
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
107228235
NCBI-ProteinID:
XP_046587542
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Position
2:complement(37276982..37299068)
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AA seq
1276 aa
AA seq
DB search
MTKYRLITEMPNPLYFLQNVRAFKGAGASSEENTINNNSNSEPPTTGNDLVHFGNDDPPG
PVVIDVGRHESTLSTWERWMKKRGIGNGEKNTTQKAELQTMIPKSGNRISRGKSREEPQV
EKLAEVCLLSHSPYRILRAAESGSLEEFTRLYRNEPGRLNIQDGRGRAAVHQAAARNRVN
ILQFIHTNGGNMNLQDNVGNTPLHVAIENVCLEAIDFLLLNNVDTSILNEKKQAPIHMAT
ELNKVDVLSTMLKYRDKIDVQQGGEHGRTALHLAAIYDHDECARILITDFQASPRKPCNN
GYYPIHEAAKNASSRTMEVFLQWGESKGCTREDMICFHDAEGNAPLHSAVHGGDIKAVEL
CLKSGAKISTQQQDYSTPVHLACAQGAIDIVKLMFALQPSEKYACLTSCDVQKMTPLHCA
AMFDHPEIAEYLILEGADINALDKEKRSPLLLASARGAWRTVHSLIRLGADIYLKDVNHR
NVLHLVVMNGGRLEEFAEEVSKSNVSLLQLLNEKDDTGCSPLHYASREGHIRSLENLIRL
GACINLKNNNKESPLHFAARYGRYNTARQLLDSEKGTFIINESDGEGLTPLHIASQQGHM
RVVQLLLDRGALLHRDHNGRNPLHLAAMSGYTQTMELLHSVHSQLLDQIDKDGNTALHLA
TMENKPNAISLLLSMGCKLLYNFMDMSAIDYAIYYKFPEAALAMVTHEERAQKIMAMKSD
KHPCVTLALIASMPRVFEAVQDKCITKANCKKDSKCFYIKYSFACLECPTQDDKFGETLV
AAAPVPLPALNAMVIHGRVELLAHPLSQKYLQMKWNSYGKYFHIANLLFYTIFLTFVTLF
SSQLMNMTSGNRMLIDMNNMNGSNVTMNEEIRQRLSTTDDFKTTTAMSVSATVTMIYVTL
SVFRELLQLYQQRWKYLLDPTNLVSWLLYISSSIMVVPIFIGRLDEIQFSCASITVFLSW
FNLLLLLQRFDQVGIYVVMFLEILQTLIKVFLVFSILIIAFGLSFYILLSKGNHISFNSV
PMSLMTTFAMMLGEIDFHGTYVEPYYHRCTKCRPEDTKGLPFPLPAFIILGLFMVLMPIL
LMNLLNGLAIGDIESVRRNAQLKRLAMQVVLHTELERKLPQMLLRKVDKKELKVYPNEMK
CKLGFLDFVLKKWFCNPFSDDDDARRVAVENQPGFPAANRAHGTDMVLENNEDYVTQELE
KQKRRLKEITVSLESQHQLLRLIVQKMEIKTEADDVDEGVSPGELRLVLKMNNKWNFPRN
NRKLRSAVSFNRGSLP
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatatcgtttaattaccgaaatgccgaacccgttgtactttttgcaaaacgtt
cgggccttcaaaggcgcaggggcttcgagcgaggagaatactatcaacaataacagtaac
agtgaacctccgacaaccggaaatgatctcgttcattttggaaacgacgaccctcccggg
cccgttgtcatcgatgttggcaggcacgagagcactctctctacttgggagcgctggatg
aaaaaacgtgggatcggaaacggggaaaaaaatacaacacagaaagcagaactacaaacg
atgataccgaagtctggcaaccggatttcacggggaaaatctcgcgaggaaccacaagta
gaaaaattggccgaagtctgtctcctcagccacagcccctatcgtattctaagggcagcc
gagagcggaagtctcgaggaattcacacggctttaccggaacgaacctggtcgtctgaac
atccaggatggccgaggtagggccgcggtgcatcaagccgcggccagaaacagagtcaac
attctccagtttattcacaccaacggcggaaatatgaacttacaagataatgtcggaaat
accccacttcacgtagccattgaaaacgtttgtcttgaagctatcgacttcctcctcctc
aacaacgtcgatacttcaattctgaacgagaagaagcaggccccgattcacatggcgact
gaattgaacaaagtggatgtacttagtacgatgttaaagtaccgagacaaaatcgacgta
caacagggtggcgaacatgggaggacggcgttgcatctcgctgccatctatgaccatgac
gaatgcgccaggatattgatcacggatttccaagcttcgccaagaaagccctgcaacaac
ggatactacccgattcacgaggctgcaaagaacgcgtcgtcaagaacaatggaggtgttt
ttgcaatggggtgagtccaagggctgcacgcgagaagacatgatctgcttccacgacgcc
gaaggcaacgcacccctgcactcggctgttcacggcggagacatcaaggctgtcgaactt
tgtttgaaatcaggagcgaaaatatcaacccaacagcaagactattctacccccgtgcat
ctggcctgcgctcagggtgccatcgatattgtgaaacttatgtttgcccttcagccatcg
gagaaatacgcatgtttgacgtcatgcgacgtacagaaaatgacgcctctccactgcgcc
gcgatgttcgaccatccggagatagctgagtacctgatcctcgagggagccgacataaac
gcactggacaaggaaaaacggtctccgttgctcttggcttctgctaggggcgcttggaga
acggttcacagcctgattcggctcggcgcggacatatacctgaaggacgttaaccacagg
aacgttttgcacctggtcgtcatgaacggcggaaggctggaggagttcgcggaagaagta
agcaagtccaacgtgagcctgctccagttgttgaacgaaaaagacgacaccggatgctca
cctctccactacgccagtcgcgagggtcacatacggagtctggagaacctcatacgtctt
ggagcttgcatcaatctgaagaacaacaacaaagaaagtcctcttcattttgcagcaagg
tacgggaggtacaacaccgcgcggcagcttctcgactcggagaagggaacattcataata
aacgaaagcgacggggaaggcttgacgccactgcacatcgcctctcagcaaggacatatg
cgagttgttcagctacttttggacagaggtgctcttcttcatcgagatcacaacgggcgg
aatcctctacacctagcagcaatgagcggctacactcagaccatggagcttctccacagc
gtccactcgcaactgctggaccaaatagacaaggatggcaacacggcattgcacctggct
actatggagaacaaacccaacgccatatccctgttactatcaatgggatgcaagctgctc
tacaattttatggatatgagtgcgatcgattatgccatatattacaaattccctgaagcg
gcgttggcaatggttactcacgaggagagggcccaaaaaatcatggctatgaagtcggac
aagcatccctgcgtgactctcgccctgatcgcatccatgccacgggtgttcgaagccgtt
caggacaagtgtattacgaaagcgaactgcaaaaaggactcgaaatgcttttacatcaaa
tattccttcgcctgcctcgagtgcccgacccaggatgataaatttggtgaaactttagta
gcagccgcacctgttcccctcccggctctcaatgccatggtaattcacggcagagtggag
cttctggcacatcccctcagccaaaaatacctacaaatgaaatggaattcttacgggaaa
tattttcacatagccaaccttctcttctacacgatttttctcaccttcgtcactctcttc
tcgtcgcagctgatgaacatgactagtgggaacaggatgctaatcgacatgaacaatatg
aacggatctaacgtaaccatgaacgaagaaattcgacagcgtctctcgacaaccgatgac
ttcaaaacaaccacagcaatgtcagtcagcgcaacggtgacgatgatttacgtaacattg
agcgttttccgcgaattacttcagctataccagcaaaggtggaagtatctacttgacccg
acgaatctggtctcttggctcttatacatatcttctagtataatggtcgtgccaattttc
atcggtagactcgacgagatacagttttcttgcgcatcgatcaccgtttttcttagctgg
tttaatttgctattactgttgcaaagattcgatcaggtcgggatatacgtcgtcatgttc
ctcgaaatactgcagacgttgatcaaagtgtttctcgtattttccatcctcattatcgcg
ttcggtctctccttctacattctcctgtcgaagggcaaccacatctcgttcaatagcgta
ccgatgtcacttatgacaacgttcgccatgatgctgggggaaatagactttcacggaacc
tacgtcgagccttattaccatcgctgcaccaagtgccgtcctgaggatactaaaggtcta
ccctttccactaccagccttcatcatactcggtctattcatggttcttatgccgatctta
ctcatgaacttgctcaacggtctagcaattggtgatatagaatccgtccgcaggaatgct
caattgaagagattggccatgcaggttgtcttgcacaccgaactcgagaggaaactaccc
caaatgttactgagaaaagttgacaaaaaagaactgaaagtctacccaaacgaaatgaaa
tgcaagcttggttttcttgacttcgtgctgaagaaatggttctgtaatccattttcagat
gacgacgatgcgcgcagagtagcggtagaaaatcaaccaggatttccagctgccaaccga
gctcacggtacagacatggtgctagaaaataatgaagattacgtaactcaggaattggaa
aaacaaaaacggcgactcaaagaaatcactgtgtcgttggaatcgcaacaccagctattg
cgtctgatagtacagaaaatggagataaaaaccgaggctgacgacgtggacgagggtgtg
tctcctggtgaattgagacttgtactgaagatgaacaacaaatggaattttccaaggaat
aacagaaaactccgaagtgccgtgagctttaacagaggatcgttaccgtag
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