Neodiprion lecontei (redheaded pine sawfly): 124293411
Help
Entry
124293411 CDS
T09006
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nlo03000
]
124293411
04121 Ubiquitin system [BR:
nlo04121
]
124293411
Transcription factors [BR:
nlo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
124293411
Ubiquitin system [BR:
nlo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124293411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
DUF659
DBD_Tnp_Hermes
zf-C2H2_12
zf-H2C2_5
hAT-like_RNase-H
zf-C2H2_aberr
SpoIVA_ATPase
MULE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
124293411
NCBI-ProteinID:
XP_046590212
LinkDB
All DBs
Position
3:complement(10221043..10232057)
Genome browser
AA seq
676 aa
AA seq
DB search
MSFTGKTPKSCWRKYFVINKDNATAQCKYCPKALKTCSNTTNLKQHMERKHSAVLEVDEN
SCAVAIQDINNCDNINPLAQTSKTTLSTGSEALFSTPKRAKLSIGAAFSRVSAYAPNGDK
SKQITQTIAEMITRDSLPYSMVEGIGFKKLMKTVAPLYNVPCRKTITELIDTKYEEKKTI
IKQKLKSIKNICLTIDEWKDMQLRSFLGVTVHFIENYEMQSMSIACEPLHENHTGEYLSE
MILKVCGDWDLSIEKIVSVTTDNGSNIVKAVEISFGRAKHIRCVAHTLNLVVDNSVKSTE
VKLFLDKVRKIVTWFHQSGVGAEELRQLQTQEKIPDGKVKHLVGDVSTRWNSQLLMIERF
ILMSSTIGSILLKHPNAPQMLQANEIVVLKEIEKVLRPFHDVTEKMSAEKYVTASKAIPM
IKCLRILLDATTIDSDLANQLKYSLQTELIKRFENIQKVHLFSVATFLDPRFKKIYLDEP
LSLSKTIDYTNRYLSLNMRNDDVLAVTHSESSVSSEVTVNGQDIWKVHHEKIVSANTSTT
KNTELDLYIAAPLSNLERHMERKHSGIISSSENKEDHAAKSGNNWQEKSIAATSTYEYTE
DSMIMIPTTSASQIEDPVGPSSPKRHKMGIEASFSKILEFGSGGSKNKQIRDAIAQLIYR
DNLSFSVVEGEVWKID
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcactggtaaaacacctaaaagttgctggcgaaagtattttgtaataaataag
gacaatgccactgcacaatgtaaatattgtccaaaagcattaaaaacgtgtagtaacact
acaaacttaaaacagcatatggaaaggaaacattccgctgttttagaagttgacgagaat
tcatgtgcagttgctattcaggatattaataactgtgataatatcaatccattggcacaa
acttcgaaaacaactttatcaacaggaagtgaggctttattttcaacgccaaaacgagct
aaattaagtattggagctgctttttcgagagtttctgcatatgctccaaatggcgataaa
agtaaacaaataacgcagactatcgcagaaatgataactcgagacagtcttccttacagt
atggtggaaggaataggattcaaaaagttaatgaagactgtggcacctttgtacaacgtt
ccatgtcgcaaaacaatcacagaacttatcgacactaaatatgaagaaaagaaaactatt
atcaaacaaaaattaaaatctattaaaaatatctgtctcacaatagatgaatggaaggat
atgcaattaagaagttttttaggtgtgacagtgcacttcatagaaaactatgaaatgcaa
tctatgagcattgcatgtgaaccgctacatgagaaccataccggagaatatttatcggag
atgattcttaaagtatgtggagattgggatttgtctattgaaaaaattgtaagtgttact
actgataatggcagtaacatagttaaggctgttgaaattagttttggtcgggcaaaacat
attcgatgtgtagctcatacactgaatttagtggttgataattcagtgaaatctactgaa
gtgaaattatttttggataaagttcgaaaaattgtaacttggttccaccaaagtggcgta
ggcgctgaagagttgcgacaattacaaacgcaggaaaaaattcctgatggaaaagtgaag
catttagttggtgacgtatccactagatggaactcacaattacttatgattgaacgtttt
atattaatgagtagtacaataggatctattttattaaaacatccaaatgcaccccaaatg
cttcaagcaaacgaaattgttgtacttaaagaaatagaaaaagttttaagaccttttcac
gatgtcactgaaaaaatgagcgccgaaaaatatgtgacagccagtaaagccatacctatg
atcaagtgtttgagaattctattagatgcaacaacgatagatagtgatttggctaaccaa
ttaaaatattcactgcaaacggagttgatcaaaagatttgaaaacatccaaaaagttcac
cttttctcagtcgcaacttttttggatcctagatttaaaaaaatttatttagatgagccg
ttatccttgtcaaagacaatcgattatacaaaccgatatttgagtttgaacatgagaaat
gatgatgttctagcagtgacccattctgaatcatcggtttcatcagaagtgacggttaac
ggacaagatatatggaaggtacaccatgaaaaaatagtgtcagcaaacacgtcaacgacc
aagaatacagagcttgacttgtatattgctgcaccgttatcaaatcttgagcgacacatg
gaaaggaaacactctggtatcataagtagtagcgaaaataaagaggatcatgcagccaag
tcgggaaacaattggcaggaaaaatcaattgcagctacatctacatacgagtatactgaa
gactctatgattatgataccgaccacttccgcatctcaaattgaagatcctgtagggcct
tcatctcctaaacgacataaaatgggtattgaagcatcattctcaaaaatattagaattt
ggatcagggggttcaaaaaacaaacagattagagacgctatagcacaattgatataccgc
gataatctttctttcagcgtggtcgaaggagaagtttggaaaattgattaa
DBGET
integrated database retrieval system
