Neodiprion lecontei (redheaded pine sawfly): 124294017
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Entry
124294017 CDS
T09006
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlo03036
]
124294017
Chromosome and associated proteins [BR:
nlo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124294017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
124294017
NCBI-ProteinID:
XP_046593438
UniProt:
A0ABM3FZJ6
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Position
4:complement(2675462..2681038)
Genome browser
AA seq
1099 aa
AA seq
DB search
MNVVDKRKSVNSSRGRGGRQNTRVDRGLEIFPKYQLYGASQQPVLRSNGFNAVNTKMAAL
KTPAKNNRKSSTSSSSVTRSSQRKISTPYNTGVTGSSSTPTTGAGSPFVIAITEGRGDAR
GEVGIAVVNVQHPHLILSQISDRHAYMKTLTKVLLFKPIEIIMPDTMIRKSGTGGNLYEC
IRDKFPGLNIAAVSRQHFSNTDGLDRIRTLCAPEYSSVEIYVKQKFYALAAAGALLKYIE
YTQNILYVEKSMYVEFQSSQDTTVIDIDIDSAQNLELVTHDKNFNKYTLLGMMDRCLTPG
GKRYLRASILQPSCNKRIIEDRQACVSELVEDNPLMISVQSHIRRLCNVDQLLVVGLNSP
QKDNVASAEKYLNYVLSLKTTLEVIPLLHTALRNTKANFFRKVLENLKDKRYDLMMDKIL
EVLQPDAQYVAGFNTSTMQRCFALKSGLNDMLDIARQAYCELIDDMKGMVETLALKYNLP
LILGCSASLGYHIQMDSPKYRPIKITNLPRIFIEVQKHKNSYLMTTEALLVLSQRCKDAC
EELHLMSNVMLKGVLNDIREHISCLYQLSNDIAELDLIVSLARISSLSNYTRPSFGSRTE
LKNSMHPLMDLTGTGVPVPNDVNVSPTHNFNVITGPNMGGKSVYLRQIVMLQIMAQIGCY
VPAEIAEFRITDRIFCRLCFEDSIECNASSFVLEIKETQYILQTVTSNSLVIIDELCRGT
TVEEGETIAFAICEQLLNTSAFVFFTTHFLSLTLLAELYPNVTNYHFGTMCRPLEGSTEQ
RLIYTHKLNPGIIFAKNYGLSLAETSGIRISIVKHARLLVQKSREGTKPVIQSQQIVNIE
GKICYDEVSKIHRLIQDGEFNVKTVLECVRRLENSNISVSEQENSSCNDQNTGSAQSSML
SITERYNRLRQKRLLDTPASDGNLMAQRSFVEPKAGPSNIVMNTNSLGPSPSKKSQVIEM
PHSAICLTEGKIVPDFGKQDLRRLRTYSWKEESKPIRQITSFPNPQNIEPPHSPAPTIKL
DEEPYEFSPQNSNKSESPSIIDLVSQLSTDTIMAKISARRKEAEIFRQIEGENFQELQFY
NSVLSRTASSVTIKNIKHQ
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtagataaacgaaaatcggtcaattcatcgagaggaagaggcggtagacag
aatactcgagttgatcgcggacttgaaatatttccgaaatatcagctttatggagcttca
caacaacctgtgctacgatcaaatggattcaatgctgtaaacactaaaatggctgcactg
aaaacaccggccaaaaataatcgtaaatcaagcacatcttcctcgtctgtcactcgcagc
agccagcgaaagatttcgacaccttataataccggcgtcactggaagctcgtcaacacct
acgacaggagcaggttcaccatttgttatcgcgatcactgaaggccgtggagacgccagg
ggggaagtgggtattgctgtggtaaacgtgcagcacccacatctaattctttcccagatc
agcgatcgtcatgcctatatgaaaaccttgacaaaagttctcctcttcaaaccgatcgaa
attatcatgccggatacaatgattaggaagagcgggactggtggaaatctctacgagtgt
ataagggataagtttcccggactcaatatcgctgctgtttctcgacagcatttcagtaat
acagacggcttggatcgcataagaacattatgtgcccccgaatattcttccgtggaaata
tacgtgaagcagaaattctatgcccttgcagccgctggtgctttgctaaagtatatagag
tacacgcagaatattttatacgtggagaagtcaatgtacgtcgagtttcagagttctcaa
gatacaactgttatcgatatagacatagacagtgctcagaacttggaactagtaacacat
gataaaaatttcaacaaatacacgctgctgggtatgatggacagatgcttgactccagga
ggtaaaagatacctgcgagcctcaattttgcagccctcttgtaataagcgtataatcgaa
gatcgccaagcttgtgtctctgaactggttgaggataatccgttaatgatatctgtacag
tctcatataagaagattatgcaacgttgatcagctccttgttgtcggtctgaactcacca
cagaaagataatgtagcaagtgcggaaaaatacttaaactatgtactttcactaaaaact
actttggaagttattcctttgctgcatacagctctccgaaatacaaaggcgaattttttt
agaaaagtcttggagaatctgaaagataaacggtatgacttgatgatggataagattctg
gaagttctgcaacctgatgcgcaatatgtggcaggtttcaatacctcaaccatgcagcgc
tgctttgctctgaagagcggattaaatgacatgctagatatcgctcggcaagcttactgc
gaactcatagatgacatgaaaggaatggttgagactctggctctgaagtataatttacca
ttgatactaggatgtagcgcttcgctcggatatcatatacagatggattccccgaagtat
agaccaattaaaatcacaaacctaccacgcatatttatagaagtgcaaaagcataagaat
agttatctcatgacaacggaagccttgctagtattgagtcaacgatgtaaagatgcttgc
gaagaactccatctaatgagcaatgttatgctgaaaggagtccttaatgatatcagagaa
catatcagttgtctgtatcagctgagtaatgacatagcagagctcgacctcatagtctca
ctggcacgtataagctcactttccaactataccaggccgtcgtttggctcaagaaccgaa
ttgaaaaattccatgcatccgctgatggatctcactggtactggtgttccggttcctaat
gatgtgaatgtgtcacctacacataatttcaatgtaataactggacctaatatgggaggg
aaatcagtttatttgaggcaaattgtgatgctacagataatggcacagattggatgttat
gtgccagcagaaatagctgagtttcgaataaccgatcgaatcttttgcagactatgtttt
gaagatagcattgaatgcaatgcatcaagttttgttctagagatcaaggaaacgcagtat
attttacaaacagtaacatccaattcacttgtgataatagacgagctatgcagaggaaca
accgttgaggaaggagaaactattgcgtttgctatttgcgaacaactactgaatacatca
gcatttgtgttcttcactacacactttctaagtttaactctcctagccgaattatatcct
aatgtcacgaactaccattttggaaccatgtgccggcctctggaaggctctacagagcag
agactgatttacactcacaaactaaaccctggaatcattttcgcgaaaaattatgggctg
tcattagctgagacttctggaattcgtatctcaatagtcaaacacgcacggctgttggtt
caaaagtcaagagaaggaactaaacccgtgatacaaagtcagcaaattgtgaatatagaa
gggaagatatgctacgacgaggtttcaaaaatccaccgccttattcaagatggcgagttc
aatgtgaaaacagttctcgaatgtgttagaagacttgaaaattctaacatttccgtttct
gagcaagagaattcttcatgcaatgaccaaaatacaggctctgcccagagctctatgctt
tctattacagagagatataacagacttcgccagaaaagacttctagacactccggcatca
gatggcaatttaatggcccagagatctttcgtggaaccaaaagcaggaccaagtaatatt
gtaatgaataccaattcactaggcccctcgccaagtaaaaagtctcaagtgattgagatg
cctcattctgcaatctgccttacggaaggaaaaattgtgccagattttggaaaacaagat
ttgcgaagactgaggacatattcctggaaagaagaatcaaaacccatcagacagattact
tcattcccaaacccgcaaaatattgaaccacctcattctccggcaccaacaataaaactt
gatgaagaaccgtacgagttctcacctcaaaattcaaacaaaagtgaaagtccgtcaata
atagacctagtatcgcagttatcaaccgatactattatggcgaaaattagtgcgcgtaga
aaggaggcagagatatttagacaaatcgagggcgagaattttcaagaacttcaattttac
aactcggtcctttcacgaactgccagctcagttacaattaaaaatatcaagcatcagtag
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