KEGG   Neisseria lisongii: PJU73_04500
Entry
PJU73_04500       CDS       T09339                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
nls  Neisseria lisongii
Pathway
nls02024  Quorum sensing
nls03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nls00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PJU73_04500 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PJU73_04500 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nls03019]
    PJU73_04500 (hfq)
   03036 Chromosome and associated proteins [BR:nls03036]
    PJU73_04500 (hfq)
Messenger RNA biogenesis [BR:nls03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PJU73_04500 (hfq)
Chromosome and associated proteins [BR:nls03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PJU73_04500 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WCL72363
UniProt: A0AAW5AIV9
LinkDB
Position
1008265..1008552
AA seq 95 aa
MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHA
ISTIVPARAVSLQHENKAPAASNLVQVETVQAAAE
NT seq 288 nt   +upstreamnt  +downstreamnt
atgacagctaaaggacaaatgttacaagatccttttttgaacgccctgcgtaaagagcat
gtgccggtttccatctatctggtaaacggcatcaaactgcaaggccaagtcgaatctttc
gaccaatacgttgtattgctgcgcaacacctcggtaacgcaaatggtttacaaacacgcc
atttccaccatcgttcccgcccgtgccgtaagcctgcaacacgaaaacaaagccccggcc
gcatccaatctggtgcaggtagaaaccgttcaggcagctgcagaataa

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