Neisseria lisongii: PJU73_07955
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Entry
PJU73_07955 CDS
T09339
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nls
Neisseria lisongii
Brite
KEGG Orthology (KO) [BR:
nls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nls03016
]
PJU73_07955
Enzymes [BR:
nls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PJU73_07955
Transfer RNA biogenesis [BR:
nls03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PJU73_07955
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
WCL71262
LinkDB
All DBs
Position
complement(1723065..1724927)
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AA seq
620 aa
AA seq
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MNIFYEESGQFKVASVVQKNDSTYQVDTQHGKRTKVKANNVFAEFDGDMAAFLDKAQAEA
ADIDTDLLWEVCGEDEFSAEAIAGEYFGHTPAKTELAATLIALYAAPMYFYKKGKGVFKA
APEETLKQALAAVERKKQQDAQIESWAEALTAGEMPSEIQADLKTILHAPDKQALTYKAF
TKAADALKLSAYELAKRSGGIASVPQYLQDGFEVKHFPKGTGFPEIAVPPLPELPQAAAA
AFSIDDESTTEVDDALSLTDLGNGMKRVGIHIAAPSLAVERGSDIEKVIHERLSTVYFPG
SKITMLPENWIAAFSLDSGDYRPAVSIYFDVDTEFNISLPSCKIEAVKIADNLRIQAIEP
HFNAETGLDESGEMKFAHHADLIWFYRFAIALQKARGKYEPERAPQYDYSVEVDSDGIVG
ICRRERGSPIDTLVSEMMILANSTWAQMLDEHDLPGLFRVQPSGKVRMSTQSEPHIGMGV
QHYGWFTSPLRRAADYINQKQLISLIDGNAEPLFQKNDADLFAALRDFDTAYTAYADFQR
QMESYWSLVYLQQQGIKELTATILKEDLVRIEGLPLTARATGIPFDALPKSQVLLNITEL
DAEKQFIALNYVKAVAPNVA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttttacgaagaatccggtcagtttaaagtggcatcggtggtgcagaaaaac
gattccacctaccaagtcgatacccagcacggcaaacgcaccaaagtcaaagccaataat
gttttcgccgaatttgacggcgatatggcggcgtttttggacaaagcgcaggccgaagcg
gccgacatcgacacggatttgctgtgggaagtctgcggcgaggacgagttttccgccgag
gccattgccggagaatatttcggccacacgcctgccaaaaccgagctggcggcaacctta
atcgccctgtatgccgccccgatgtatttctacaaaaaaggcaaaggcgtgtttaaagcc
gcccccgaagaaacgctgaagcaggcgttggcggcggtggaacgcaaaaaacagcaggac
gcgcaaatcgaaagctgggcggaagccttaacagccggtgaaatgccgtctgaaatccaa
gccgatttaaaaaccattcttcatgcgcccgacaaacaggcgctgacctacaaagccttt
accaaagcggcggacgcattgaaactgtctgcctacgaattggccaaacgcagcggcggc
attgcgtctgtgccgcaatatctgcaggacggttttgaagtcaaacatttccccaaaggc
acgggtttccccgaaatcgccgtgccgccgctgcctgagttgccacaagccgcagcggcc
gctttctcgattgacgatgaatccaccaccgaagtggacgatgctttgagcctgaccgat
ttgggcaacggcatgaagcgggtcggtatccacatcgccgccccgtcgctggcggtcgag
cgggggagcgacattgaaaaagtgatacacgaacgcttgagtacggtgtatttccccggt
agcaaaatcaccatgctgccggaaaactggattgccgccttcagcttggacagcggcgat
tatcgtcctgcagtgagcatttattttgatgtggacaccgagttcaacatcagcctgccg
agctgcaaaatcgaagccgtcaaaattgccgacaacctgcgtatccaagccatcgagccg
catttcaacgccgaaaccggtttggacgaaagcggcgagatgaaatttgcccaccatgcc
gatttaatctggttttaccgttttgcgattgctttgcagaaggcacggggcaaatacgag
ccggagcgtgcgccgcaatacgattacagcgtggaagtggattcagacggcatcgtcggt
atctgccgtcgggagcggggttcgccgattgatacgctggtgagcgaaatgatgattctc
gccaactcgacttgggcgcaaatgctggacgaacacgacctgccgggcttattcagagtg
cagcctagcggcaaagtgcgcatgagtacccaatccgaaccgcatatcggcatgggcgtg
cagcactacggctggttcacctcgccgctgcgccgtgctgccgactacatcaaccaaaaa
cagctgatcagcctgattgacggcaacgccgaaccgctgttccaaaaaaacgatgccgac
ctgtttgccgctctgagggatttcgacaccgcctacaccgcctacgccgatttccaacgc
cagatggaaagctattggagcttggtgtatctgcaacagcagggcatcaaagagctgacc
gccaccattttgaaagaagatttggtacgcatcgaaggcctgccgctgaccgcccgtgcc
accggcattccgtttgatgccctgcccaaatcgcaggtattgctcaatatcaccgagctt
gatgctgaaaaacagtttatcgctttgaattatgtcaaagccgttgccccgaacgtggcg
taa
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