Nilaparvata lugens (brown planthopper): 111043246
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Entry
111043246 CDS
T07276
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111043246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nlu03036
]
111043246
Chromosome and associated proteins [BR:
nlu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
111043246
REST complex
111043246
Heterochromatin formation proteins
Other heterochromatin formation proteins
111043246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
DHR-2_Lobe_A
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
111043246
NCBI-ProteinID:
XP_022183842
LinkDB
All DBs
Position
X:complement(99439138..99549446)
Genome browser
AA seq
1369 aa
AA seq
DB search
MKRRAEDMVKGDVGGNVGYPPPGSLSPSRHPPPRAIPTVQPYLPQAVKSSVPDLNLGQQY
QVPNFATGPMANVNPAMKSNGGGGVNTAGPSGAGPSMQGAGPIPSGSHGMHPSNRHKMHG
GSTTPPSVGGGSSALQQQQFQRLKVEDALSYLDNVKMKFNNHPQVYNDFLDIMKEFKSQS
IDTPGVIERVSKLFQGHPDLILGFNTFLPPGYKIEVSTNDSGFRVQVSMPSPATSTTTTI
VPPVPAHSAPVHQPPVAPLALTTNSPASPATVVVSSSNKPLIIGSSNVVAPNPVVAAVPQ
QSPSAAISQALSHYSTHLNAAAAAAAAVTDCPPAPSHPEHQPTQPINQNQGQSQSQPVEF
NHAINYVNKIKNRFQDQPEIYKKFLEILNTYQKDQKNYKDAGKQLTEAEVYAQVAKLFQN
QDDLLAEFGQFLPDATNHQATSQSKVMSADHPPPPRSAKPLGLKMSAPFPSTSSTPSPSS
AGPSGPKFSAQSSSHANSAPGPSGLSNQGPAPMKRSPSSFAGPSGLQQMHHQSQPKKQKL
SAVSSSREVPASDAGKYGALSDYAFFDKVHKSLRNIDIYENFLRCLVLFNENMISRAELL
SLVSPFLCRSPDLLQWFKCFIGETGSTSNPSQSGNDYSLDSHNSMMSSVNRQDRPPGEFA
MEIDFSTCKRLGASYCAVPKDYVHPKCSGRSQLCREVLNDSWVSFPSWSEESTFVTSRKT
QFEEYIYRCEDERFELDVVLETNLAAIRVLETLQKKINRMSPDEISKLKFDSSMGGTSPT
LMDRAVRRLYGDKATDIMEGLRLQPLTCIPMVLKRLKQKDEEWRDAQKGFNKVWKEQNEK
FYLKSLDHQGINFKQNDLKALRSKSLFNEIETLCDERHDQAEEACEQTQIGPHMSFIYKD
KGVLDDAANLLIHHVKRQTSINKEDKQRIKQLLRQIIPDFFYHPRQELSEDEREDTNDKM
DEDAADSDKEEDGPGKEDGAKEPEDIKPPLHALSTFHDESYTLFFGTNKWYLFMRLHQIL
CERLTKISEKAAILAQEESIESELRTPSAAMALRLKPRSNYLKGVTVDGYYTAFLEMVKN
VLDGNMDNNAYEDTLREMFGIHAFVAFTLDKVVSYAVRQLQHLVMEESCIECTDLYLKEA
RRGGAGGTCASAQARANYEIAYQRKAEAILNDENCFKIVLYKLECKLTIELLDSEGEREG
RQARASQNCEYEESQNRNQNGSDGDDRTSGKAVFLARNVRLTTNKSPNESDEAQPPKRST
DDDNECTFNLNNYRVVYAVDRDSFLYRRYAILRAKQTHPSLSQRLGEKFRRWHERWLNEH
VDQSQINHSTEWLMGRAPDHVPNFTQVLSNNSLTKAPYRLFNRYQVKRL
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgagcagaggacatggttaagggggatgtgggtggaaatgttggctaccca
cctccaggttccctatcaccatccagacatcctcctcctagggcaatcccaacagtgcaa
ccttacttgccacaagctgtgaaatcatcggttccggatctgaatcttggacaacagtat
caagtaccgaatttcgcaactggacctatggcgaatgtcaacccggccatgaagagcaat
ggcggaggtggtgttaacaccgctgggcccagtggtgcagggccatccatgcagggtgca
ggccctatcccatcgggctctcatggaatgcatccgtctaatcgtcataagatgcatgga
ggctccactacgcctccatccgttggcggtgggagttctgctttacaacagcagcagttc
cagcgtttgaaggttgaggacgctctttcttatctggacaacgtgaagatgaagttcaac
aatcatccacaagtctacaatgacttcctcgatatcatgaaggagtttaaatctcaaagt
attgacactcccggtgtcattgaaagagtttccaaactcttccaaggccacccagatctg
atattgggattcaacacgttccttccaccaggatacaagatcgaagtgtctaccaatgat
tccggatttagggtgcaagtgagtatgccttctcctgcaacttcgacaaccaccaccatt
gtccctccagtacctgcgcactcggctccagtgcatcaaccgccggtagctcctctggct
ctcaccacgaacagtcctgcatctcctgccacagtcgttgtatccagctccaacaaaccg
ttgattattgggagttcgaacgtcgtggctccgaatccggtcgttgccgccgtaccgcag
cagtctccgtctgcggctatatcgcaggctctgtcgcactactccactcatttgaatgcc
gcagcagcggctgcggccgcagtcactgactgtccgccggcgcccagtcatcccgaacac
cagcccacccagccgatcaaccagaaccaaggccagagtcagagccaaccggtcgaattc
aaccatgctatcaactacgtcaacaaaatcaagaaccgattccaagatcaaccagagatt
tacaagaagtttctggagattctcaacacctaccagaaggatcagaagaactacaaagat
gctggaaaacaactcacggaagcggaggtgtatgcgcaggttgctaaactcttccagaat
caagacgatctgttggcagaattcggacagtttctgcctgatgctactaatcatcaagct
acatcgcagagtaaggttatgagtgccgatcatcctcctccaccaaggagtgctaagccg
ttgggtctgaagatgtccgccccgtttccgagcactagttccactccgtccccgagcagt
gctggtccctctggacccaagttcagtgcgcagagtagcagtcatgccaatagcgctccg
ggaccttcaggcctctccaatcaaggcccagctcccatgaaaaggtcgccgtcttcattc
gccggcccatcgggtctgcagcaaatgcaccatcagtctcaaccaaagaagcaaaagttg
agtgcagtcagctcaagccgcgaagttcccgcatctgatgctgggaagtatggagctctt
tctgattatgcattcttcgacaaagttcacaaatccttgcgcaacattgacatttacgag
aacttcttacgatgtctcgttctgttcaatgagaacatgatatctcgcgcggaactgttg
agtcttgtgtctccgttcctgtgtcgcagtccggatctattgcaatggttcaaatgcttc
attggcgaaaccggatccacctccaatccatcccagtctggcaatgactattcgctcgat
agtcacaactctatgatgtcttctgttaatcgccaggacagacctcccggtgaattcgct
atggagatcgatttctctacttgcaaacgtcttggcgccagctactgcgctgttccaaag
gattacgttcatcccaaatgtagtggaagatctcagctctgcagagaagtattgaatgat
tcgtgggtatccttcccatcttggtctgaggagtccactttcgttacatcaaggaagaca
cagtttgaagagtacatctatcgttgcgaggatgagagattcgagcttgatgtagttctt
gagactaaccttgctgcaatcagagttcttgagactcttcagaagaagataaacaggatg
tcacctgacgagatcagcaaactcaaatttgacagttctatgggtggaacatctcctact
ttgatggacagagctgtcagacgattgtatggtgacaaggccacagatataatggaagga
ttgagactgcaaccgcttacatgtattccaatggtcttgaaacgactgaaacaaaaagat
gaggaatggagagatgcccagaagggattcaataaagtttggaaggaacaaaatgagaaa
ttttatctgaaatcactggaccatcaaggaatcaatttcaaacagaatgatttgaaagct
cttcgctcgaagtctcttttcaatgagattgagacactgtgtgacgagagacacgatcaa
gccgaagaggcatgcgaacaaactcagattgggcctcacatgtcgttcatctacaaagat
aaaggtgtactggatgatgcggccaacttgctgattcatcatgtcaaacgtcaaaccagc
atcaataaggaggacaagcaaaggattaagcagttgctccgccagatcattccagatttc
ttctatcatcctagacaggaactgagtgaagatgagcgcgaggacactaatgataagatg
gatgaagatgctgctgattcggacaaagaagaggatgggcccggcaaagaagatggtgcc
aaggaacctgaggacatcaaacctccacttcatgctctcagcacattccatgacgaatcc
tacactctgttcttcggtaccaataaatggtatctgtttatgagactgcatcagattttg
tgcgagagactaactaagatctctgaaaaagcggcaatacttgcccaagaagagagcatt
gaaagcgagctcaggactccatccgctgcaatggctttgcgtctgaagcctagaagcaac
tatctcaagggagttaccgttgatggctattacacagccttcctggagatggttaagaat
gttctcgatgggaatatggacaacaatgcttatgaagatacgctgagagagatgtttgga
atacatgcgtttgttgcattcactctggataaagttgtttcatatgctgtcagacagctt
cagcacttggtgatggaagagtcttgcattgagtgcaccgatttgtacttgaaagaagct
cgtagagggggcgctggggggacatgcgcctctgcccaggcgcgagccaactacgagata
gcttaccaacgcaaagctgaagcgatactcaatgacgaaaactgcttcaaaattgtcctg
tacaagcttgaatgcaaactcactattgagttgttggattcggaaggagaacgtgaagga
agacaagctagagcttcacagaactgcgagtatgaggagtctcagaacaggaaccaaaat
ggttcggacggtgatgaccgtacctccggtaaagctgttttcttagcaagaaatgtgagg
cttacaacaaataaatccccaaatgaatcagacgaagcgcaaccaccgaaacgctccact
gatgacgacaacgagtgtacattcaacttgaacaactacagagttgtctatgctgtagat
cgagatagttttctctaccgtcgatatgccattttaagagcgaaacagacccacccctcc
cttagtcaaagactcggagaaaaattccgaagatggcacgaacgatggttaaatgaacac
gtcgaccagtcgcaaatcaaccactcgactgagtggctaatggggcgggcacccgatcat
gttccgaatttcacacaggtcctaagcaacaacagtttaaccaaagcaccttaccgactc
tttaatcgttatcaagtaaaaaggctctaa
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