Nilaparvata lugens (brown planthopper): 111043759
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Entry
111043759 CDS
T07276
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111043759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlu03041
]
111043759
03009 Ribosome biogenesis [BR:
nlu03009
]
111043759
Enzymes [BR:
nlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111043759
Spliceosome [BR:
nlu03041
]
Complex A
U1 snRNP components
U1 related factors
111043759
Complex B
111043759
Ribosome biogenesis [BR:
nlu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111043759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111043759
NCBI-ProteinID:
XP_022184494
LinkDB
All DBs
Position
5:complement(28053205..28069927)
Genome browser
AA seq
737 aa
AA seq
DB search
MYGNYNNHQNNANFNRFRNNEQQQQQQPYKNRFWVPRIDQVNQNGLINGFERMAIGPKGK
GTMPGQGLRKPIWDKTALMPFEKNFYEPHQDVKNRSEDEVGEYRSRKEITVKGQNIPFPS
QFFKEGNFPTYVMDVIMRQGFSEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPAA
VHIKNQSKLNRGDGPIALILAPTRELAQQIQSVAHDFGGTSSIRNTCIFGGAPKGPQAKD
LERGVEIVIATPGRLIDFLERGTTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR
QVLMWSATWPKEVQALAEDFLNDYVQINIGSLELAANHNIRQIIDVCNDAEKEGKLMKLL
KDIGNERGFKAIIFVETKKKVDDITKLIKKDGFPAICIHGDKSQQERDYVLSEFRSGKCA
ILVATDVAARGLDVEDVKYVINFDYPNTSEDYIHRIGRTGRCQQAGTAYTFFTANNQRQA
KELISVLTEAKQDVNPKLHELANMAKNTMNGKQNRNRWNNNRTRENTNGFVNKGTWNQNI
QDVKEFKPSQPNRFQAGGGGQYQNGGGYKGQNYGGYQQQNGGGYGGHPGAGGGAYGGYMQ
QQQQQQQQQQPRPFRNQYANGSQHSQDSQSGGYGGYQQRNYAAPDRNQQAGQGNYQQRFQ
QQRYQKYGGGQENGNVYSMPPPMMPTYSGSDQSPMMNPKFYQQSRPPPQTSHCHSPPMPM
AMPFPPYPAYSMQTVQQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaattacaacaatcatcaaaacaatgctaactttaacaggtttcgcaacaac
gagcagcaacagcaacagcagccttacaagaaccggttctgggttcccaggatcgatcaa
gtcaatcagaatggcctgatcaacggcttcgaaaggatggcaatcgggccgaaaggaaag
ggcactatgcctggccagggtctcaggaagcccatttgggacaaaactgctctcatgccg
tttgagaagaacttctatgaaccgcatcaagatgtcaaaaatagaagcgaagacgaagtt
ggagaatacagaagtagaaaggagattactgtgaagggacagaacattccgtttccgtcg
cagttcttcaaggagggcaactttcccacctacgtgatggacgtgatcatgcgccaaggc
ttctccgagccaacagccattcaggcgcaaggctggccgattgcgctcagcggacgcgat
ctagtcggcattgctcaaactggctccggcaaaactttggcttacattctgccagcggcg
gtgcacatcaagaaccagagcaagcttaaccgcggtgacgggccgatcgcgctgatcctg
gcgccgacacgggagctcgcccagcagatccagtcagtggcgcacgacttcggcggcacg
tcgtccattcgcaacacgtgcatctttggcggcgcgcccaagggaccgcaggccaaggat
ttggagcgcggcgtcgagattgtcatcgccacacctggacgcctcattgacttcctcgag
agaggcaccaccaacctcaagcgatgcacctacctcgtgctcgacgaggccgaccgtatg
ctcgacatgggcttcgagccgcagatcaggaagatcatcgaacagatccgacctgaccgg
caagttctgatgtggtcagcaacgtggcccaaggaggtgcaagctctggctgaggacttc
ctcaacgattacgtgcaaatcaacattggctcgctggagctggctgccaaccacaacatc
cgacagatcatcgatgtgtgcaacgatgccgaaaaggagggcaagctcatgaaactgctc
aaagacattggcaatgaacgcggcttcaaagctatcatctttgttgaaacgaaaaagaaa
gtggatgacatcacaaagctcatcaaaaaggatggattccctgcgatctgcattcacgga
gacaagtcccagcaagaaagagattatgttctgtcagaattccgcagtggaaaatgcgcc
atcttagtagctaccgatgtcgccgctcgtggattagacgttgaagacgtgaagtatgtt
ataaactttgactacccgaacacgtctgaagactacatccaccggatcgggcggaccgga
cgctgccagcaggcgggcacagcctacacgttcttcacggccaacaaccagcgccaggcc
aaggagctgatctcggtgctcaccgaggccaaacaggacgtcaaccccaagctgcacgag
ctcgccaacatggccaagaacaccatgaacggcaaacagaatcgtaacagatggaacaat
aacaggacaagagagaatacaaacggctttgtgaacaagggcacatggaaccagaacatc
caggatgtgaaggagttcaagccgagtcagccgaaccgattccaagctggaggcggcggc
cagtaccagaacggaggcggctacaagggccagaactacggcggataccagcagcagaac
ggcggcggatacggtgggcatccaggcgcggggggcggagcctatggcggatacatgcag
cagcaacaacaacagcagcagcagcagcagcctaggcctttccgcaaccagtacgccaac
ggcagtcagcacagtcaggattcgcagagtggaggctatggcggctaccagcaacgcaat
tacgccgcacccgaccgcaaccagcaggccggccaaggcaactatcagcaacgcttccag
caacagcgctaccagaagtacggcggcggtcaggagaacggcaacgtctactcgatgccc
cctcccatgatgcccacctactcgggctccgaccagtcgcccatgatgaaccccaagttc
taccagcagagccgtccgcccccacagaccagccactgccactctccccccatgcccatg
gccatgcccttccccccctaccccgcctacagcatgcagactgtccagcagtag
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