Nilaparvata lugens (brown planthopper): 111044050
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Entry
111044050 CDS
T07276
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03013
Nucleocytoplasmic transport
nlu03015
mRNA surveillance pathway
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111044050
09122 Translation
03013 Nucleocytoplasmic transport
111044050
03015 mRNA surveillance pathway
111044050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111044050
03041 Spliceosome [BR:
nlu03041
]
111044050
03009 Ribosome biogenesis [BR:
nlu03009
]
111044050
03012 Translation factors [BR:
nlu03012
]
111044050
Enzymes [BR:
nlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111044050
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111044050
mRNA cycle factors
Stress granule specific factors
111044050
Spliceosome [BR:
nlu03041
]
Complex C
Other components
EJC/TREX
111044050
Ribosome biogenesis [BR:
nlu03009
]
Eukaryotic type
90S particles
Helicases
111044050
Translation factors [BR:
nlu03012
]
Eukaryotic type
Initiation factors
eIF-4
111044050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_22
AAA_30
UvrD-helicase
TniB
Motif
Other DBs
NCBI-GeneID:
111044050
NCBI-ProteinID:
XP_039282273
LinkDB
All DBs
Position
4:69666579..69678997
Genome browser
AA seq
402 aa
AA seq
DB search
MSEPRARRVVTEDLSNVEFETSEDVDVVYTFDSMGLREELLRGIYAYGFEKPSAIQQRAI
KPIVKGRDVIAQAQSGTGKTATFSIAILQTLDTQLRDAQVLCLSPTRELAVQIQKVILAL
GNFMNVHCHSCIGGTGLGEDLRKLDFGQHVISGTPGRVFDMIRRRALRTRNIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQNERDTIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaccgcgtgcaagaagagtggtaactgaggatctttcaaacgttgaatttgag
acaagtgaagatgttgatgttgtgtatacttttgattccatgggattgcgagaggaatta
ctgcgaggaatatacgcttatggtttcgaaaagccttcagcaatccaacagagagctatc
aagccgatagtgaaaggcagagacgtgatagctcaggctcaatcgggtactggtaaaaca
gccacattctccattgcaattctgcagactttggacactcagttgcgcgatgcccaggtg
ttgtgtctctcacccaccagagaactcgccgtacagatacaaaaggtcattcttgctctt
ggtaatttcatgaatgttcactgtcattcctgtattggaggaacaggtttgggagaagat
ttgcgaaaattggattttggtcaacatgtcatatctggaacacctggaagagtatttgat
atgattaggagacgcgctctgaggacaaggaacataaaaatgttggtactggacgaagcc
gatgaaatgctgaataaaggtttcaaagagcaaatatacgacgtatatcgatatcttcca
ccagcaactcaggtttgtctgatctctgctacactcccccatgaaattttggaaatgacc
agcaaattcatgactgaccccatcagaatccttgtaaaacgtgatgaactgacactggaa
ggaatcaagcagttctttgttgccgttgaacgcgaagaatggaagtttgacacactctgt
gacctgtatgacacactcactattacacaggctgtcatcttctgcaatactaagcgaaaa
gtggattggttgacagaaaaaatgagggaagccaactttacagtcagttctatgcatggt
gatatgcctcagaatgagagagataccatcatgaaagaattcagatcaggcaccagtcgt
gtgctgatcacgacggacgtgtgggcgcgaggcatagacgtgcaacaggtgtcactggtg
atcaactacgacctgcccaacaaccgtgagctctacatccaccgcatcggtcggtcgggt
cgcttcgggcgcaagggtgtcgccatcaactttgtcaaaagcgacgacatcaggattctg
cgcgacatcgaacagtactactccacgcagatcgacgaaatgcctatgaatgtggctgat
ttgatctaa
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integrated database retrieval system
