KEGG   Nilaparvata lugens (brown planthopper): 111044340
Entry
111044340         CDS       T07276                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
nlu  Nilaparvata lugens (brown planthopper)
Pathway
nlu03013  Nucleocytoplasmic transport
nlu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nlu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111044340
  09122 Translation
   03013 Nucleocytoplasmic transport
    111044340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nlu03019]
    111044340
   03041 Spliceosome [BR:nlu03041]
    111044340
Messenger RNA biogenesis [BR:nlu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111044340
Spliceosome [BR:nlu03041]
 Complex C
  Other components
   EJC/TREX
    111044340
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111044340
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I ANAPC4_WD40 WD40_Gbeta Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_NOL10_N Tricorn_2nd DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_EML WD40_MABP1-WDR62_1st eIF2A RMC1_N WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 PD40 Beta-prop_WDR75_1st PAC11 Beta-prop_TEP1_C B-prop_COPA_B_2nd Beta-prop_DCAF12 PROPPIN ASA1 TRM82_WD Beta-prop_ACSF4 Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR41 DPPIV_N
Other DBs
NCBI-GeneID: 111044340
NCBI-ProteinID: XP_022185148
LinkDB
Position
4:complement(72093563..72110546)
AA seq 325 aa
MSRSWFPSRIDELQGFFKTHNKIREYQAHSSKVHSVGWSCDGRRLASGSFDKSVVIFNLD
RDRLNKEFTFRGHGGSVDQLCWHATNSELLSTASGDKSVRIWDARYQKCAAVINTKGENI
NITWSPDGNTIAVGNKEDLVTFIDSRTHKIKAEEQFHFEVNEISWNNESSLFFLTNGQGC
IHILSYPDLELQHALKAHPGTCICIEFDPVGRYFATGSADALVSLWDINELACVRTFSRL
DWPVRTISFSFDGSMLASASEDLVIDVAEVATGAKVVDIPVEAATFTVAWHPSAYLLAYA
CDDKDQYDRKRDTGNLKVYGFPSTD
NT seq 978 nt   +upstreamnt  +downstreamnt
atgtctagatcgtggtttccttcaagaattgatgaacttcaaggatttttcaaaacacat
aataagataagagaatatcaagctcattcttcaaaagttcactcagttggttggagttgt
gacggtcgccggttggcctccggttcatttgacaaatctgttgtgattttcaatcttgac
agggatagattgaataaagagttcacattccgagggcacggtggcagtgttgatcaacta
tgttggcacgctaccaattcagaactgctgagtacagctagcggtgataaaagtgtgagg
atatgggatgctcgttaccaaaaatgtgcagctgttataaacacaaaaggtgagaacata
aacatcacctggtcaccagatggcaacacaatcgctgtggggaacaaagaggacctagtc
actttcatagactcgagaacgcataaaatcaaagccgaagaacagttccatttcgaagta
aacgagatcagctggaacaatgagagctcgcttttcttcctcaccaacggccagggttgc
atacacatactgagctatccagacctggagctgcagcatgcactgaaggcacacccgggc
acgtgcatatgcatagaatttgacccagttggtcgctacttcgccacaggatcagccgat
gcactcgtttcactctgggacatcaatgagttggcttgtgtgcgaacgttttctagactg
gactggccagtgcgcacgatcagcttcagctttgacgggagcatgctggcgtcggcgagc
gaggacctggtgatcgacgtggcggaggtggcgaccggcgccaaagtggtcgacatcccc
gtcgaggcggccaccttcaccgtcgcctggcacccgtccgcctacctgctcgcctatgcc
tgcgacgacaaggaccagtacgaccgcaagcgcgacaccggcaacctcaaggtctacggg
tttccgtccactgattag

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