Nilaparvata lugens (brown planthopper): 111044340
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Entry
111044340 CDS
T07276
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03013
Nucleocytoplasmic transport
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111044340
09122 Translation
03013 Nucleocytoplasmic transport
111044340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111044340
03041 Spliceosome [BR:
nlu03041
]
111044340
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111044340
Spliceosome [BR:
nlu03041
]
Complex C
Other components
EJC/TREX
111044340
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111044340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Tricorn_2nd
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_EML
WD40_MABP1-WDR62_1st
eIF2A
RMC1_N
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
PD40
Beta-prop_WDR75_1st
PAC11
Beta-prop_TEP1_C
B-prop_COPA_B_2nd
Beta-prop_DCAF12
PROPPIN
ASA1
TRM82_WD
Beta-prop_ACSF4
Beta-prop_ELP1_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR41
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
111044340
NCBI-ProteinID:
XP_022185148
LinkDB
All DBs
Position
4:complement(72093563..72110546)
Genome browser
AA seq
325 aa
AA seq
DB search
MSRSWFPSRIDELQGFFKTHNKIREYQAHSSKVHSVGWSCDGRRLASGSFDKSVVIFNLD
RDRLNKEFTFRGHGGSVDQLCWHATNSELLSTASGDKSVRIWDARYQKCAAVINTKGENI
NITWSPDGNTIAVGNKEDLVTFIDSRTHKIKAEEQFHFEVNEISWNNESSLFFLTNGQGC
IHILSYPDLELQHALKAHPGTCICIEFDPVGRYFATGSADALVSLWDINELACVRTFSRL
DWPVRTISFSFDGSMLASASEDLVIDVAEVATGAKVVDIPVEAATFTVAWHPSAYLLAYA
CDDKDQYDRKRDTGNLKVYGFPSTD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctagatcgtggtttccttcaagaattgatgaacttcaaggatttttcaaaacacat
aataagataagagaatatcaagctcattcttcaaaagttcactcagttggttggagttgt
gacggtcgccggttggcctccggttcatttgacaaatctgttgtgattttcaatcttgac
agggatagattgaataaagagttcacattccgagggcacggtggcagtgttgatcaacta
tgttggcacgctaccaattcagaactgctgagtacagctagcggtgataaaagtgtgagg
atatgggatgctcgttaccaaaaatgtgcagctgttataaacacaaaaggtgagaacata
aacatcacctggtcaccagatggcaacacaatcgctgtggggaacaaagaggacctagtc
actttcatagactcgagaacgcataaaatcaaagccgaagaacagttccatttcgaagta
aacgagatcagctggaacaatgagagctcgcttttcttcctcaccaacggccagggttgc
atacacatactgagctatccagacctggagctgcagcatgcactgaaggcacacccgggc
acgtgcatatgcatagaatttgacccagttggtcgctacttcgccacaggatcagccgat
gcactcgtttcactctgggacatcaatgagttggcttgtgtgcgaacgttttctagactg
gactggccagtgcgcacgatcagcttcagctttgacgggagcatgctggcgtcggcgagc
gaggacctggtgatcgacgtggcggaggtggcgaccggcgccaaagtggtcgacatcccc
gtcgaggcggccaccttcaccgtcgcctggcacccgtccgcctacctgctcgcctatgcc
tgcgacgacaaggaccagtacgaccgcaagcgcgacaccggcaacctcaaggtctacggg
tttccgtccactgattag
DBGET
integrated database retrieval system