Nilaparvata lugens (brown planthopper): 111044635
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Entry
111044635 CDS
T07276
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03022
Basal transcription factors
nlu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111044635
09124 Replication and repair
03420 Nucleotide excision repair
111044635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111044635
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111044635
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111044635
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111044635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-C3HC4
zf-RING_UBOX
zf-RING_2
TRAF3_RING
zf-C3HC4_2
zf-RING_4
RING_XB3-XBAT31
zf-P11
Motif
Other DBs
NCBI-GeneID:
111044635
NCBI-ProteinID:
XP_022185528
LinkDB
All DBs
Position
2:complement(42683621..42708469)
Genome browser
AA seq
373 aa
AA seq
DB search
MIFLNALIIIFKDFYCQNNIEASAKTFPHQIITFDLLLDLKKNTYFLYPEMDDQACPRCK
TTKYRNPSLKLMVNVCGHALCESCVDLLFLKGSGSCPDCDVPLRRSNFRVQLFEDPAVEK
EVDIRKRVLKDFNKKEEDFSSLNDYNDYLETVETIIFNLTNNIDVMETNKRIEQYKRENK
EIILKNKIKIGREELELEELLEEEKHIDQIRKKEIVKEELELKRKKIKEKEDLIDELMFS
SQDAKKIVNEFAQISQAAKEMEQTNKPAAAPARATQFSTGIKFGRSSQQSVYQIPIIEDG
PLYTYSEPEKVVDGPEPPAWSEIETARYIVHMRPETVEERAGGYTANIACMRALQEAFMG
LYHVSRPEQDQSS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgattttcttgaatgctttgataattatatttaaggatttttactgtcaaaataatatt
gaagcttcagcaaaaacttttcctcatcaaattattacatttgatttattattagacttg
aaaaagaatacctacttcctatatccagagatggatgatcaagcatgcccaagatgcaaa
acaacaaaatatcgaaatccttctttaaaacttatggtcaacgtatgtggacatgcatta
tgtgaaagttgtgtcgatcttctctttttaaaaggatctggttcttgcccggattgtgac
gttccattgagacgcagcaacttccgtgttcaacttttcgaagatcctgctgttgaaaaa
gaagtcgatattaggaaaagagtattgaaggatttcaataagaaggaagaagatttcagc
tcacttaacgactacaatgactatttagagaccgttgaaaccataattttcaatctgacc
aataatattgatgtgatggaaacaaataagaggattgaacagtataagagggaaaacaaa
gaaataattttgaaaaacaagattaaaattggaagggaagagctggagctggaagaatta
ctagaggaggagaagcatattgaccagataaggaagaaagaaattgtcaaggaagagttg
gagttgaagaggaagaaaattaaagagaaagaagacctaatagatgagctaatgttttct
agtcaagatgccaagaaaattgtcaacgaattcgctcaaattagtcaagctgccaaagaa
atggaacaaacgaacaaaccagctgctgctcccgctagagctacgcagttctcaactggt
attaaatttggaaggagttcacaacagagtgtctatcagataccgatcatcgaagacggt
ccactctacacttacagcgaacctgaaaaagtagtggacggtcccgaaccaccggcatgg
agtgagatagagacagctaggtacattgtgcatatgcggcccgaaacagtcgaagagaga
gctggaggatacacggccaatattgcttgtatgagggcattgcaagaggcgttcatggga
ctctatcatgtttcacggccagagcaagatcaaagtagttga
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