Nilaparvata lugens (brown planthopper): 111045411
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Entry
111045411 CDS
T07276
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111045411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111045411
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111045411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_19
TPR_1
ANAPC3
ARM_TT21
SRP_TPR_like
SPO22
Motif
Other DBs
NCBI-GeneID:
111045411
NCBI-ProteinID:
XP_022186505
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All DBs
Position
2:complement(14657590..14677834)
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AA seq
674 aa
AA seq
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MADKDGAGGEGGISDQERDWAQTALADFGRGHYSTCLQLLARLEAARPHDIKVLHNRAVV
EYYKTDLRKTDLFKKNMNAVCAQAHVNIDDLDSLEDVEHCVIYYNQAVVLYHLKQYSSAL
KIMNKVFSFIAPMEESLAHRVCLLLVELHLCTQQPDKALALIAYIENQFVSTENAAQGKM
IAAAAAADNQKEEPPLPVTLAAVDAATDAFRVKLLQCRARCLLATCALTACKRDLQLLAT
CTLPASTTSAPLFLNANLHYLRGQFDKAIATLQSVPIDNALQVFKETGESPSVAYYNDMG
CLHHYLAKPNLANFYLSKAVAENKAAMALGAGTGATGAGPGADPLSGRPLHTVGGSRAPQ
LMYNLGVSLLHAGKPLMAFDCLTEAVQVYHMNPRLWLRLAECCIMAQRPDNSVDFDFQVK
RKQLIQGVVGSGPHRKVILNPLVFSNSHYSYEAQSFAIPVASLEFASLCLRNAQLLVPGG
RMVGEEERPLPTPPSPPCDPRHVPQLRVCIRAAAAFVALGLGDPVLALEHANALIAAANV
AASPVHKFLGHVYAGEALILLDRIQEAIDHLNPERCPDMNAAAAATRPLRPWCPQTTDTA
RSVLQYNLAVALVVSGRYEKAGDLLKQVWQSTGGGSKNNVPIHVIALAMYVELLLGHADV
ARTIVKQNCMQSQR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagatggggctggtggagaggggggcatttcggatcaggagcgtgattgg
gcgcagactgcgctggccgacttcggccgaggccactactcgacctgcctacagctgctg
gctcggctcgaggcggctcgacctcacgacatcaaggttctgcacaatcgcgccgtcgtc
gagtactacaagactgatctgcgcaagaccgacctcttcaagaagaacatgaacgctgtc
tgtgcgcaggcacatgtgaacattgacgatctggactcattggaagatgtggagcattgt
gtcatatattacaaccaagcagtggtgctgtaccacctcaaacaatacagctcggctttg
aagatcatgaataaggtgttctcttttattgcgcccatggaggagagcctggcccaccgc
gtgtgcctgctgctggttgagctgcacctgtgcacgcagcagccggacaaggcgctagcg
ctgatcgcctacatcgagaaccaattcgtgtccaccgagaacgcagcccagggcaagatg
attgccgccgctgcagcagccgacaaccagaaggaggagccgcccctgccggtgacgttg
gcagccgtggacgcagcgaccgacgcattccgcgtgaagctgctgcaatgccgcgctcgc
tgcctgctcgcaacgtgcgcgctgactgcgtgcaagcgcgacttacagttgctcgccacg
tgcacgctgcctgcctccaccacctcggcgccactcttcctcaacgccaacctgcactat
ctgcgcggccaatttgacaaggccattgctacgctgcagagtgtgccgattgacaacgcc
ttacaggtattcaaagagacaggcgaatcgccgtcagtggcctattacaacgacatgggc
tgtctgcaccactacctggccaaacccaacctggccaacttctacctaagcaaggcggtg
gccgagaacaaggcggccatggcgctgggggcggggacaggagccacaggggcggggcca
ggggcggaccccctgtcgggacggcccctgcacacggttggcggcagccgcgccccccag
ctcatgtacaacctgggcgtcagtctgctgcatgctggcaagccgctgatggccttcgat
tgtctcaccgaggctgttcaggtgtatcacatgaatccgcggctgtggctgcgtctggcc
gagtgctgcataatggcgcagagacccgacaactcggtcgactttgacttccaggtgaaa
cgcaaacagctgattcagggcgtcgtcggctccggcccgcatcgcaaggtcatcctcaat
ccgctggtattcagcaacagtcattacagctacgaagcacagtcgttcgcaatcccggtg
gctagtctggagttcgcgtcactgtgcctgcgcaacgcccagctgctggtgcccgggggt
cgtatggtcggggaggaagagcgaccactgcctactccgccatcacctccctgcgatccc
cgccacgtgccgcagctgcgcgtctgcatccgggcggcggctgcgtttgtcgcgctcggc
ctcggtgatccggttctggcactcgaacacgccaatgccttgattgctgccgccaacgtt
gccgcgtctcccgttcacaagttcttgggacacgtgtacgcgggcgaagcgctgatcctg
ctggaccggatacaggaagcgatcgaccacctgaacccggaacggtgtccggacatgaat
gcggctgcggctgcgacccggccgctgcggccctggtgtccgcagaccaccgacacggcc
cgctccgtgctccagtacaacctggccgtagcactcgtcgtcagcggccggtacgagaag
gccggtgatctactcaaacaggtgtggcagtcgactggaggtggatcgaaaaataatgtt
cctattcatgtaatcgctttggcaatgtatgtagaacttcttttaggccatgcagatgtt
gcgagaaccatagtcaaacaaaactgcatgcagagccaacgatga
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