Nilaparvata lugens (brown planthopper): 111045760
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Entry
111045760 CDS
T07276
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111045760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111045760
03036 Chromosome and associated proteins [BR:
nlu03036
]
111045760
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111045760
Chromosome and associated proteins [BR:
nlu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111045760
PBAF complex
111045760
GBAF(ncBAF) complex
111045760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SCHIP-1_C
BRCT_2
Motif
Other DBs
NCBI-GeneID:
111045760
NCBI-ProteinID:
XP_039281683
LinkDB
All DBs
Position
4:complement(50626396..50673331)
Genome browser
AA seq
975 aa
AA seq
DB search
MLALEPKKDGGPNVKFFEAPDTISQFDGIKAWMQKNCKKYVQTDPPNSKGLATLVMQLIQ
FQEDNFGKNVNKPLLTRLPMRCFLDFKPGGALCHILAAMYKFKIEQGWRRFDFQVSKSPS
RMDRNVEMLMSVEKALVQNKCLTMPSVFIRPDVDKATATKVKDVIKRHQGTVADTEEEAT
HVIYPASDPLDEEYARPSFKRDRMVMMHWYYFPDSYDSWVSVDLPVDPPDSPATHTSQWK
VSASWALDLDQYNEWMNEEDYEVDENGRKKVHRLRLTVDDLMSTSDPERTKKKQKRKRSP
SPPVKMGKRKSGRSPAVVNPKKVKSEEEADDLTKDMDEPTPEPNVQEVTVPKPGSSTSSK
KDSESQPIKSGTVADLDEEMDKGEDSQTGKMSDTNTQDVTMKEDQSQEDNVTEQTHHIVI
PSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTAA
RRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPSGLQPVNP
PKTAQPSAAKTLLDMDKKVTAPDHLAPNSDIEPGTNFGLKLDQYSRKPAALRNKTAASLT
RDWSEQETLLLLEGLELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDHEAGGGA
LGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFASIKDEVPAALMDAH
IKNVEANTAADGKFDPAAGLIQSGIAGTVPEKEEESEKAEKKDAESGSKEEAKEGGAATN
KEGGGAATAATGEAAAEVVVKKEVTEKESGEGEAMDVDKKEESSEGEVKEETERDRVVKD
AQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMER
EREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRLAAEQQGQQTTPSTTPTPPSPQ
AVPTPQQAATSPSPA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgttggccttagagccaaaaaaggatggtggaccaaacgtaaaattctttgaagctcct
gatacaatatcacaatttgatggaattaaagcatggatgcaaaagaattgcaaaaagtac
gtacaaaccgatccaccaaacagcaagggtctggcaactcttgtgatgcagctaatccaa
ttccaggaggataattttggtaaaaatgttaataaacctctgcttactaggcttccgatg
cgttgcttcctggatttcaagccagggggcgcactgtgccatattctggctgctatgtac
aagttcaagatagaacagggctggagaagattcgatttccaggtcagtaagagcccttct
agaatggatcgcaacgttgaaatgctgatgagtgtggagaaggcactggtgcagaataag
tgcctgacaatgccttctgtatttattcggcccgacgtcgacaaagccacagccaccaaa
gtcaaggatgtcattaaaaggcatcagggtacagtagcagatacggaggaggaggcgaca
cacgtcatctacccggcgtcagaccctctggacgaagagtacgcgcgaccctcattcaag
cgagaccgcatggtgatgatgcactggtactacttccccgactcctacgactcctgggtc
agcgtcgacctgcctgtcgatccgccagactcgcccgccacgcacacctcgcagtggaag
gtttccgcgtcttgggctttggacctggatcaatacaatgaatggatgaacgaagaagac
tatgaagttgacgaaaatgggaggaaaaaagttcacaggttgagattgacagtggatgat
ctgatgagtacatcggatccagaaagaacaaagaaaaagcaaaagagaaagagatcacca
tctcctcccgtgaaaatgggaaagagaaagagtggtcgcagtccagccgtggtgaacccg
aagaaggtgaagagtgaggaggaggccgacgacctgaccaaggacatggatgagcccact
ccggagcctaacgtgcaggaggtgactgtgcccaagccaggctcttcaacttcgtcgaaa
aaggatagcgaatctcagccaataaagagtggcacagttgctgatttggatgaagaaatg
gataagggtgaagacagtcaaaccggcaagatgtctgatacaaacactcaggacgtgacg
atgaaggaggaccagagccaggaggacaacgtgactgagcagacccatcacatcgtgatc
cccagctactcggcgtggttcgactacaactcgattcacacgatcgagaagcgcgcgatg
cccgagttcttcaacggcaagaacaagtcgaagacgcccgagatctacctggcctaccgc
aacttcatgatcgacacctaccgcctcaacccgaccgagtacatcaccagcacggcggcc
cgtcgcaacctcgctggcgacgtgtgcgccatcatgcgggtgcacgccttcctcgagcag
tggggattgatcaactatcaggttgacgccgacagtcgtcctactccgatggggccgccg
ccgacgtcgcacttccacgtgctctcggacacgccctccggcctgcagccggtcaaccca
cccaagacggcgcagccctccgccgctaagactctcctcgacatggacaagaaggtcacc
gctcccgaccacctcgcccccaactcagacatcgaacccggcaccaatttcggcctcaaa
ctcgatcagtacagccgcaagccagccgcgctgcgcaacaagacagcggccagcttgacg
cgcgactggagcgagcaggagacgctgctgctgctggaaggcctcgaactgtacaaggac
gactggaacaaggtgtgcgagcatgtcggcacccgcacccaggacgagtgcatcctccac
ttcctccggctgcccatcgaggacccctatctcgaggaccatgaagctggtggtggagca
ctgggtccgttggcctaccagccgattccgttcagcaaggcgggcaacccgatcatgtcg
actgtggccttcctggcgtcggtcgtcgacccccgcgtcgccgcttcggctgccaaggcc
gctatggaggagttcgccagcatcaaggatgaagtacctgctgccttgatggatgcacat
attaagaatgttgaggctaacactgctgctgatggcaaattcgatcctgcagcaggactg
atacagagcggtatcgccggtacagttcccgaaaaggaggaagaaagtgaaaaagccgag
aagaaagacgccgaaagcggttcgaaagaagaagccaaagaaggtggtgcagccacaaac
aaagaaggaggtggagcagcaacggcagcaaccggagaggcagcagccgaagtggtggtc
aagaaagaagtcaccgaaaaggaatctggcgaaggagaagcgatggatgtggataagaag
gaggagagcagcgaaggagaggtgaaggaggagacggagcgcgacagagtcgtcaaggat
gctcagttgcagtcggcggcagccgcagccctggccgcagctgcggtcaaggccaagcat
ctggccgctgtcgaagaaagaaaaataaaatcgttggtggcgttgctggtcgaaacccag
atgaagaaattggagatcaagttgagacactttgaagagctggaaaccacgatggagcgc
gagagagagggtttggaataccagagacagcagttgatacaggagagacaacagtttcat
ttggagcaactgaaggcggccgagtttagagcgagacaacaggcgcatcagcggctggct
gcagagcaacaaggacagcaaaccactccttccaccacacccaccccaccctcgccacag
gctgtgccaacacctcagcaagcggctacttccccttctcccgcctga
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