Nilaparvata lugens (brown planthopper): 111045836
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Entry
111045836 CDS
T07276
Name
(RefSeq) protein SMG9 isoform X1
KO
K18735
protein SMG9
Organism
nlu
Nilaparvata lugens (brown planthopper)
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111045836
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111045836
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
ABC_tran
RsgA_GTPase
nSTAND3
AAA_18
MMR_HSR1
Smg8_Smg9
AAA_16
MeaB
AAA_14
ATPase_2
URGCP_GTPase
nSTAND6
Roc
Motif
Other DBs
NCBI-GeneID:
111045836
NCBI-ProteinID:
XP_039294175
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Position
11:complement(32407397..32432645)
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AA seq
453 aa
AA seq
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MCDKEFEKNRDLRRKKFYNTYKEREDKQYGSRRLPIILTKTDADRDKDGRSGMKSKNVNE
SQDKPLSQPTIILRTRDGDNRASSSGQRVPRTKKENENQTPLYHIAAKNTNTENVNPLAP
PPEMKCSVKLLDEFLQFSDSALKYLTEQTDFLVVGVLGMQGVGKSTLVSHLAGNSIDQTD
TVFKVQTFEQQEKASHCTAGVDVYVTANRLILLDSQPMLSGSLMDGHGQSHGPGHGQGHG
HGLVDCSLDLAPDNRNSAEVSSLQIAAFLLSVCHIVIVVQDWFFDPNLLRFLQSAEMLKP
PTPTTSQDEELVEYFPHVLFLHTHAEAADFSNQRLELMQKVYNQTFARSKLQTQTGLSIA
NTGVFESLSFNEDNLNIYLLPDLVEEQNGDNHFKGHPGYVELMRKLRFQIHGATRSPLTH
NTLTEKNWLHYASKIWEGVKKSTFFFEYSRLMP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgataaagagtttgaaaagaacagagatctaagacgcaagaaattttataatact
tataaggaaagggaggacaaacaatatggcagcagacgtttgccgatcattttgacgaaa
actgatgcagatcgcgacaaggatggtcgttctggtatgaagtcaaaaaatgtcaatgaa
agccaagacaagccactatcacagccgacaatcatactgcgcactagagacggtgacaac
agggcatcatcttctggtcagagagtccctagaacaaagaaggaaaatgagaatcaaact
cctctgtatcatatagctgctaaaaacaccaatactgagaatgtaaaccccttggctcct
cctccggaaatgaaatgcagtgtgaaattgttggacgaatttctacagttcagtgactct
gctttgaagtatctgactgagcaaactgattttcttgttgtgggtgtgctgggaatgcaa
ggagtgggaaagtccactcttgtctcacacttggccggcaattctatcgatcagacggac
acagtgttcaaagtgcaaacgttcgagcagcaggagaaggccagtcattgcacggctggc
gtggacgtgtacgtgacggcaaaccgcctcatcctgctggactctcagccaatgctgtcc
ggctcactgatggacggacacggacagagtcacggacccggtcacggtcaaggacacgga
cacggactcgtcgactgttcgctggacctggcgcccgacaaccgcaactcggccgaggtc
agctccctgcagattgccgccttcctgctctccgtctgccacattgtcatcgtagtgcag
gactggttcttcgaccccaatctgttgaggtttctacagtcggctgaaatgttgaaaccc
cccacaccaactacatcacaagacgaagaactcgtcgaatatttccctcatgtactattc
ctccacactcatgccgaggctgctgatttctcaaatcaaagattggaattgatgcagaaa
gtctacaaccaaacattcgccagatccaaactacagacacaaaccggtctgagcatagcg
aatactggtgtttttgagtcgttatctttcaacgaggataacctcaacatttatctatta
ccagacctggtagaggagcagaacggtgataatcatttcaaaggacatcctggctatgta
gaattgatgaggaagttgcgctttcaaatacatggtgctacaagaagtcccctaactcat
aacacattgactgagaagaattggctacattacgcttccaagatttgggaaggtgtaaag
aagagtacatttttctttgaatacagtcgattaatgccatga
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