Nilaparvata lugens (brown planthopper): 111046815
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Entry
111046815 CDS
T07276
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111046815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111046815
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111046815
U7-dependent histone pre-mRNA processing factors
111046815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Rhamno_transf
Motif
Other DBs
NCBI-GeneID:
111046815
NCBI-ProteinID:
XP_022188146
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Position
4:complement(25034391..25049576)
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AA seq
738 aa
AA seq
DB search
MTSIIKVHALSGAHDETPPCYILQVDEFRFLLDCGWSETFDQEFVKELKRHVNQIDAVLL
SYPDPLHLGALPYIVGKCGLNCPIYATIPVYKMGQMFMYDLYQSRHDMEEFEMFTLDDVD
AAFDKIVQLKYNQSVPMKGKGFGLTIVPLPAGHMIGGTVWKIMKIGEEDIIYAVDFNHKK
ERHLNGCELEFQRPSLLITDASNATYQQARRRTRDEKLMTNILQTLRNNGNVLVAVDTAG
RVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNN
PFQFKHLQLCHSMAELSKVSSPKVVLASTPDMECGFSRELFLQWSSQENNSIIITSRTSP
GTLARDLIDLGTNRMIQLQVKRRVRLEGAELLEYHRKEKEAKDKKPDKKGLLDVYISSDS
EDDLEILNINRGKHDLMVKHEFNKQQTSFFKNSKKHYPIFPFFEAKMKCDEYGEIIKPED
YKLADVNPEGEDNKENFEVKEEDLTIDMTEVPTKCVSFTKTVQVSCSVQFIDFEGRSDGE
SMMKILSQLKPRRLVLVRGSPDNTATMADQIQQWNDIRVFTPGKGDVVDATTESHIYQVR
LTDALISSLEFQKGKNSELAWLDAQIAVKSKGVDATPMETDQDNENVAEDEIYTLEPLPV
HMIKGHQPSFINELKLSDFKQVLTKNNISSEFMGGVLWCCSGKVAVRRHEAGKVTLEGCL
SEDYYRVRDLLYEQYAII
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattataaaagtacatgctctctctggagctcatgatgagactcctccatgc
tacatattacaagttgatgagttcagattcttgttggattgcggctggagtgaaaccttt
gatcaagaatttgtaaaagagctcaaaagacatgtgaaccagattgatgctgttctcctg
tcttatcctgacccgttgcatctgggagctctgccctatattgtcggcaaatgtggcctc
aactgcccgatctacgccacgattcctgtttataaaatgggtcaaatgttcatgtatgac
ctatatcagtctcgacatgatatggaggagttcgaaatgtttactttagatgacgttgat
gcagcttttgacaaaattgtccaactgaaatataatcagagtgttccaatgaaaggaaaa
ggatttggcttaacaatagttccactaccagctgggcatatgataggtggcacagtatgg
aaaataatgaagataggcgaggaggatataatatatgcagttgatttcaatcataaaaag
gagcgacatctaaacggttgtgagttggagttccagaggccgtcgcttctgatcacagat
gcttcaaatgccacctatcagcaagctaggagaagaacaagggatgaaaagttgatgaca
aatattctgcaaacgttgcgtaacaacggtaacgttctggtggccgtcgacacagctggt
cgtgttttagagctggctcacatgttggaccagctgtggaggaataaggagtcaggactt
ctggcttactcgttggccctcctcaataacgttagctataatgtagtcgaattcgcaaaa
tcacagattgagtggatgagtgataaattgatgaggagttttgagggcgctagaaataat
ccattccagttcaagcatctgcagctctgtcatagtatggctgaattaagcaaagtttct
agtcctaaggtcgttttagccagtacaccagatatggaatgtggtttctcaagggagctc
ttcctgcagtggagctcacaagaaaataatagtattatcatcacctccagaacttcacct
ggtacgttagctagagatttaattgatctaggaactaatagaatgatacagctacaagtc
aaaaggcgtgttcgtttagagggcgctgaacttctagagtatcatcggaaggaaaaagaa
gctaaggacaaaaaacctgataagaaaggtcttctagatgtgtacataagttcagactcc
gaagatgatttggagatactgaatatcaacagaggaaagcacgatcttatggtgaaacac
gagttcaacaagcagcaaacaagttttttcaagaacagcaaaaagcattatcctatattc
ccgttctttgaagccaagatgaaatgcgacgagtatggcgaaataatcaagccagaagac
tacaagctggcagatgtgaatcctgaaggtgaagacaacaaggagaactttgaggtgaaa
gaggaggatctaacgatagacatgactgaggttcccaccaaatgcgtgtcgttcaccaaa
acagtgcaggtttcctgttcggtgcagttcattgatttcgagggtcggtcggatggcgag
tccatgatgaaaatcctctcgcaactgaaaccgaggcggttggttctagtgcgaggatcg
cccgacaacacagcgacaatggccgaccagatccaacagtggaacgatatccgcgtgttc
actcctggcaagggtgatgtggtcgacgccaccaccgagagtcacatctaccaagtgaga
ctgaccgatgcgttgatcagctcgttggagttccagaagggcaagaactctgagctggcc
tggctcgatgcccagattgctgtcaagagtaagggcgtcgatgccactccaatggagact
gatcaggacaatgaaaatgtcgccgaagatgaaatatataccttagaacctttgccagtt
catatgataaagggtcatcaaccgtcatttatcaatgagctaaaattatcagacttcaag
caagtattaacaaagaacaacatttcttctgaattcatgggcggtgtgttgtggtgctgc
agtggaaaagtggctgttcgcaggcacgaagcgggtaaagtgacattggaaggatgttta
tctgaagattactatagggttagagatttattgtatgaacaatatgctattatttaa
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