Nilaparvata lugens (brown planthopper): 111047034
Help
Entry
111047034 CDS
T07276
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111047034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlu03041
]
111047034
Enzymes [BR:
nlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111047034
Spliceosome [BR:
nlu03041
]
Complex A
U2 snRNP components
U2 related factors
111047034
Complex B
111047034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
RSRP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
111047034
NCBI-ProteinID:
XP_039278413
LinkDB
All DBs
Position
1:22859713..22888073
Genome browser
AA seq
1015 aa
AA seq
DB search
MHHRKRSRSRSRSSSPEHYKRNKNSHGRERSTKEYRRRSRSRERSRRSHSRDRDRKLFKK
DKKSSESRSKRSYGKGRRTRSRSHSRSPRSRSRSRSHSRERAKLKDEKKDSKVDDEPFDP
TNLDKEEEQKRLEMEMQKRRERIERWRAERKKKELEVVKKDLKSSLANLQLPTKKWNLED
DSDEEEDGKADNNKNDGEEELDPLDAFMQGVQDEVRKVNKIEGATRRTTDGQGKVAPAGS
GGLLIVTGVAKKKADNKKGELIEQNQDGLEYSSEEEEEDLTTTAANMANKQKKELAKVDH
TSIDYTPFRKDFYTEVPEIARMTPEEVEAYREELEGIRVKGKGCPKPIKSWAQCGVSKKV
LDALKKQDYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFVLPMLRHIMDQPPLEAN
DGPLSLIMAPTRELCMQIGKETRKFTKSLNLRVVCVYGGTGISEQIAELKRGAEIIVCTP
GRMIDMLAANSGRVTNLKRVTYIVLDEADRMFDMGFEPQVMRIIENIRPDRQTVMFSATF
PRQMEALARRILNKPIEIQVGGRSVVCKEVEQHVIVLEEDQKFLKLLELLGHYQNQGSVI
VFVDKQENADALLKDLMKASYQCMSLHGGIDQYDRDSTIVDFKAGKVKLLVATSVAARGL
DVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGHSYTFITPEQERYTGDIIRALEQSTV
AVPDAVRALWENYKAKQAAEGKKVHTGGGFSGKGFKFDETEAMMVNEKKKFQKAALGLQD
SDDEDLENDIDQQIESMLAPKRIVKEIKAPLGSAAAAAAAAATQGVGGQPSTDKLELARR
LASRINMAKNLGAEAKGATQQAAEAILKGGGSQPIITAKTVAEQLAAKLNTRLNYQPREE
EDNKEEEAVETFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTYYPSGK
APPEGERKLFLAIESTNELAVSKAKIEITRLIKEELLKLQTSAHHSINKSRYKVV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatcgtaagagatctcgaagtcgatccagatcttcaagtccggaacattataag
aggaataagaactcccatggcagagaaagaagcaccaaggaatatagacgaagaagcagg
tcaagagaacgatctcggaggtcgcatagtagagatcgagatagaaaacttttcaaaaag
gacaagaaatcgtcggaatctaggtctaaacgaagctatggaaagggaaggagaactcgc
tcgaggtctcattcacgatctccgagatctcgctccagatctaggtcacattccagagag
agggccaaactcaaagatgagaaaaaggattcgaaagttgatgatgaaccttttgatcct
accaatcttgacaaagaagaagaacagaaaaggcttgaaatggaaatgcagaaaagaaga
gaaaggattgagaggtggagagctgagaggaaaaagaaggaattggaagttgtcaagaag
gatctgaaatcatcgctagccaatcttcagcttccgactaagaaatggaatcttgaggat
gacagtgacgaagaagaagacggcaaagccgataacaataaaaatgatggcgaagaagaa
ctggatccattggatgctttcatgcagggcgttcaagacgaagtgcgtaaagtgaataag
atagagggcgccaccaggcgcacgacggacggacagggcaaggtggcgcctgccggctca
ggcggtctactcattgtgactggcgtcgccaagaagaaggccgacaacaagaagggcgaa
ctcatcgaacagaaccaggatggactcgagtactcatcagaggaagaagaagaggacctg
acgacgacggcggcgaatatggccaataaacagaagaaagagctggctaaagtcgaccac
accagtatcgactacactccgttcagaaaggacttctacaccgaagttcctgaaattgcg
cgaatgacgccagaagaggtcgaggcttacagagaagaacttgaaggcataagagtgaag
ggcaaaggatgtcctaaacctatcaaatcctgggctcaatgtggtgtcagcaaaaaagtt
cttgatgctttgaaaaagcaagattacgagaaacccacgccaatacaggctcaagcgata
cctgcgattatgtcaggtcgtgatctaattggaatagcaaagactggaagtggtaaaaca
ctggcatttgtgctcccaatgctaaggcacatcatggaccaaccaccactagaagcaaat
gatggaccactgtctcttatcatggcccctacaagagaattgtgtatgcagattgggaaa
gaaacaaggaaatttaccaagtcgctgaatcttcgagtggtgtgcgtgtatggtggcact
ggcatctccgagcagatcgccgaactaaagagaggcgccgaaataatagtctgcactcct
ggcagaatgatcgacatgcttgcagcaaacagtggtcgagtaacaaatttgaagagggtt
acctacatcgttcttgatgaagcggacagaatgtttgacatgggctttgaaccacaggtt
atgagaataatagaaaacatcagacctgacagacagactgtgatgtttagtgccactttt
cccagacaaatggaggccttggccagaaggatacttaataaaccaattgaaattcaggtt
ggaggaaggagtgtggtttgcaaggaagtggaacagcacgtgatagttctagaagaagac
cagaagttcttgaagctgctggaactgctaggccattaccagaaccagggcagcgtgata
gtgttcgtcgacaagcaggagaatgcagatgcgctgctcaaagacctgatgaaggcctcc
tatcagtgcatgtcgctgcacggcggaatcgaccaatacgacagggacagcacaatcgtc
gacttcaaggccggaaaggtcaagctcttggtagcaacatcagtggcagctagagggttg
gacgtgaaacaattgattctagtagtgaactacgactgtccgaaccattacgaagactat
gtgcataggtgtggtcgcacaggcagagcaggcaacaagggccactcgtacacattcatc
acgccggaacaggagcgctacacgggcgacatcatcagggcgctggagcagtcgacggtc
gccgtcccggacgcggtcagggcactctgggagaactacaaggccaagcaggccgccgag
ggcaagaaggtgcacacgggaggcggcttcagcggcaaagggttcaagttcgacgagact
gaggccatgatggtcaatgagaagaagaaattccagaaagcggctctcggtctgcaggac
tctgacgatgaggatctcgagaacgacattgatcagcagattgaaagcatgctggcaccg
aagaggatagtgaaagagattaaggcgccgctcgggtcggcggcagcggctgcggcggcg
gcggcgactcaaggggtgggaggacaaccgtcgactgacaagctggagctggctcggcgg
ctggcgtcgcgcatcaacatggccaagaacctgggcgccgaggcgaagggcgccacgcag
caggcggctgaggccatcctcaagggcggcgggtcgcagcccatcatcaccgccaagacg
gtggccgagcaactggctgccaagctcaacacacggctcaactaccagccgcgtgaggag
gaggacaataaggaggaggaggcagtcgagaccttccgcaagtacgaggaagagctcgag
atcaacgactttcctcagcaggcgcgctggcgagtcacctccaaggaggcgctcgctcag
atctcagagtactcggaggccggcatcaccgtcaggggcacctactacccctccggcaag
gcaccgcccgagggcgaacgcaagctcttccttgccattgagagcaccaacgagttggcc
gtctccaaagccaaaatcgaaatcactcgtctcatcaaagaggaacttctcaagttgcag
acctctgctcatcatagcatcaacaaatctagatacaaagttgtgtaa
DBGET
integrated database retrieval system
