Nilaparvata lugens (brown planthopper): 111047540
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Entry
111047540 CDS
T07276
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111047540
Enzymes [BR:
nlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111047540
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111047540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
UvrD-helicase
TatD_DNase
Motif
Other DBs
NCBI-GeneID:
111047540
NCBI-ProteinID:
XP_039288255
LinkDB
All DBs
Position
7:complement(20845636..20949077)
Genome browser
AA seq
1696 aa
AA seq
DB search
MAFKGVQKLNRIQSVVFDAAYHTNENLLICAPTGAGKTNVALLTIVHTLRQNIEEGVIQK
DKFKIVYVAPMKALAAEMASNFSRKLTALGVNVRELTGDMQLTKTEILQTQMLVTTPEKW
DVVTRKGSGDIALTSLVKLLIIDEVHLLHGDRGPVVEALVARTLRQVESSQSMIRIVGLS
ATLPNYLDVARFLRVNPHVGLFFFDSRFRPVPLEQTFIGIKPTKPLAQMMEMDNVCYEKL
QEMVVKGHQVMVFVHARNATSRTANVLREMAQQKGHLHMFQPEEGGQAGLARRALAKARS
KQLSELFQAGFSIHHAGLARSDRTLVEKYFGEGLIKVLVCTSTLAWGVNLPAHAVIIRGT
EIYDAKHGSFVDLGILDVLQIFGRAGRPQFDKSGHGIIITSHDKLTHYLSLLTNQFPIES
NFIACLVDNLNAEVTLGTVSTVDEAVEWLSYTYLFIRMRLNPHVYGMLPHEVMEEPLLER
KRRELINTAATALDKAKMIRYNKRTGDLSATDLGRTASYFYIKNDTIELFNEHILNDHMS
EADILKLISMAQEFEQLKVRDDELSELDTLAETNCVLTASGGSENLHGKVNILLQTFLSR
GRVQSFSLLSDLAYINQNAVRLVRALFDIMLRKNNSIMAGRLLEFCLMFEHQQWNFESEM
RQFKMLPIEIIFKMEERNLDVARLREMDSKEIGSMLHFAKMGEVVKKCAHEFPLLQMEAT
LHPITRTILKIRLFVLADFRWNDRVHGKTSEPFWIWIEDPDSNMITHSEYFLLTRKQVVS
KEAQELVMTVPLQEPLPAQYIVKATSDRWLGSCVTIPLSFKHLILPDSHPPHTDLLELQP
LPVTALCDTRFELLYPFSHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIAAEIAMFRAF
KQYPGSKVVYIAPLKALVRERIEDWRVKLGVKLNMSVIELTGDVTPDARAIASADVIVTT
PEKWDGISRSWQTRGYVRAVSLIVIDEIHLLGEDRGPVLEVIVSRTNFIASHTSRTLRVV
GLSTALANARDLADWLGIQEMGLYNFRPSVRPVPLEVHIAGFPGKHYCPRMATMNRPTFQ
AIRQHSPAQPALVFVSSRRQTRLTALDLIAFLAGEDNPKQWMHMSEQEMDQIIGSINDPN
LKLTLAFGIGMHHAGLQERDRKTVEELFVNQKIQVLIATATLAWGVNFPAHLVVIKGTEY
FDGKVKRYVDMPITDILQMMGRAGRPQFDNQGMAVVLVHDVKKNFYKKFLYEPFPVESSL
LAVLPDHLNAEIVAGSIQNRQQALDYLTWTYFFRRLLKNPSYYGLETLDAADVNHYLSGL
VEKSLKTLEDAFCVTFEEDERGVLPTSMGRISSYYYLSHMTMLHLRNNLSPTLSWQQLLD
VMCKVHEYSQLPVRHNEDILNGNLAKECPLPVDQLTLDSPHTKAFLLLQAYFSRIPMPCT
DYNTDLKSVLDQAIRILQAMIDVSAEQGWLATTLRLQQLMQSVVQGRWLKDSPLTTLPHL
SPALMRLFRRHRKWAMLPALLRIRYKGLVAILSAQLTEAEIEQIYKVLQDLPDIRMSVAL
RGSWKDAGSDEEEKVLDKTDLASGECVLSSRTSLVAGQEYTLCVKFAKLNPSKERKAHAP
RFSKPTEPGWFLTLGSIEQKELIAMKRVPPISSRCTHQLTFTAPQVPGRAQLALYLMSDT
YLGLDQQYTLDFDISC
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaaaggagttcaaaaattgaatcgtatccagtcggtggtattcgatgccgct
tatcacacaaacgagaatctgttaatttgtgcaccgactggagccggaaagacgaatgtg
gctctgctcactattgtgcacacactgcgccagaacatcgaagagggcgtcattcaaaag
gacaaatttaagatagtgtacgttgccccaatgaaagcactggcagctgaaatggcatcc
aacttctctcgtaagctgacagctctgggcgtcaacgtgagggagctgactggtgacatg
cagctcaccaaaactgagattctacaaacgcaaatgctggtcaccacacctgaaaaatgg
gatgttgtcactcgcaaaggaagtggtgatattgccttgacaagccttgttaaacttctt
atcattgatgaggttcaccttttacatggagacagaggacctgtagttgaagctttagtt
gctagaaccttacgtcaggtggaatcttcacagagtatgatccgcattgttggtctgtca
gccacgctgcccaactatttggacgtggccaggtttctgagggtgaaccctcacgtcggc
ctgttcttcttcgactcgcgattccgtccggtgccactggagcagaccttcatcggcatc
aaacccaccaaaccccttgctcagatgatggagatggacaacgtttgctatgaaaaacta
caggaaatggtagtcaagggtcatcaggtgatggtgttcgtgcacgcccgaaacgccacc
tcgagaacggccaacgttctgagagagatggctcagcagaaaggccacctgcacatgttc
cagccggaagaagggggtcaggcgggtctggcgcggagagcattggctaaagctcgctca
aaacagctgtccgaactcttccaggctggattctccattcatcacgctggtctagccaga
tctgacaggaccttagtcgaaaaatactttggagaaggcttgattaaggtgctggtatgt
acgtcgactctggcttggggtgtcaacttacctgctcacgcagttattattcggggaacc
gagatctacgacgcgaaacacggatcattcgtcgatctgggcattctggatgtgctgcaa
atattcggaagagccggccggccacagttcgacaaatccggccacggaataatcatcaca
tcccacgacaagttgactcactacctttccttgctcaccaaccagtttcccattgagagc
aacttcatcgcttgccttgttgacaatttgaatgctgaagtaactcttggaacagtgtca
accgtggacgaagctgttgaatggttgagctacacctacctcttcataagaatgcgtttg
aatcctcatgtctatggaatgttgccgcacgaagttatggaggaacctcttttggaacga
aagcgacgtgagctgataaacacagctgccactgctctcgataaagccaaaatgattcgc
tacaacaaacgaactggagatttgtcagcaacagatcttggtcgaactgccagctacttc
tacataaaaaacgacactatagaactattcaatgagcatattctgaatgatcacatgagt
gaagccgatattctgaaactgatatcaatggctcaggagtttgaacaactaaaagttagg
gacgacgagctgagtgagctggacactctggcagaaacgaactgtgtgctgacggccagt
ggtggaagcgagaacctgcatggaaaagtcaacattctgctgcaaacctttctgtctaga
gggagagtgcaatcgttttcgctcttgtccgatctggcttacatcaaccagaatgccgta
cgtttggtgcgagccttgttcgacataatgctgcggaagaacaactcaataatggccggt
cgactgctcgagttctgcctgatgttcgaacaccaacagtggaatttcgagtcggagatg
aggcaattcaaaatgcttccaattgagattatattcaaaatggaagagcgcaatctggat
gttgccaggttgagggaaatggactcgaaagaaattggttcaatgctacactttgctaaa
atgggagaagtggtgaagaaatgcgcgcatgagtttcctcttttgcaaatggaagccact
ttacatccgataacaaggactattttgaagatccgactttttgtcttagcagatttcagg
tggaatgacagagtgcacggtaaaacatcagaacccttctggatatggatagaagatccc
gactccaatatgatcactcactctgaatacttcttgttgactagaaagcaggttgtgtca
aaagaagcgcaagaattggtgatgacggtgccgttgcaagagccgcttccagctcagtac
attgtgaaggcaacatcggaccggtggctggggtcctgcgtcaccattcctctctccttc
aagcatctcattctgcctgacagtcatcctccgcacacggatctattggaactacagcct
ctgccggtgaccgctctctgtgacactcgcttcgagctgctctatcctttctctcacttc
aacccgattcaaacgcagatcttccactgtctctatcacaccgacaacaatgtcttgctt
ggagcaccgaccggctctggaaagactatagccgccgaaattgccatgttcagagctttc
aaacagtatccaggctcaaaggtggtgtacattgctcctttgaaagccctagttcgggag
agaattgaagattggagagtgaaacttggtgtcaagctcaacatgtctgtgatagaatta
accggtgacgtgacgcctgacgctcgtgccatcgcgtcggctgacgtgatcgtgacgaca
ccggagaagtgggacggcatctctcgcagctggcagacgcgtggctatgtgcgcgccgtc
tcactcattgtcatcgacgagatacacctgctcggagaggatagaggccctgtgctagag
gtaattgtgtcgcggaccaacttcatagcgtcgcacaccagtcgaactctgcgagtggtc
ggtctgtcgacggccctcgccaatgctcgcgatctcgccgattggttgggcatacaagag
atggggctgtacaacttcaggccgtcagtgcgcccagtgccgctggaagtgcacatcgcc
ggcttcccgggcaaacactactgtccgcgcatggccaccatgaaccgacccaccttccag
gccatccgccagcactcgcccgcgcagccggccctcgttttcgtgtcctctcggcggcaa
acgcgcctcaccgccctcgacctcatcgccttcctcgccggcgaagacaaccccaagcag
tggatgcacatgagcgaacaggagatggatcagatcatcggctccatcaacgatcccaac
ctcaaactcacactagcgtttggtatcggcatgcaccacgcaggcttacaagagcgcgac
aggaaaactgtcgaggaactgtttgtgaaccagaagatacaagtcctcatcgctactgcc
accctagcctggggcgtcaacttccccgcgcatctagtcgtcatcaaaggcaccgagtac
ttcgacggaaaggtcaaacgttacgtagacatgcccattacagacatcctacaaatgatg
ggacgtgctgggcgaccccagttcgacaaccaagggatggctgtagttcttgtgcacgac
gtgaagaagaatttctacaaaaagttcctctacgagccctttccagtggaatcgagtctg
ctcgccgtgctacccgatcatctgaatgcggagatagtggccggctccattcagaatcgc
cagcaagcgcttgattatctgacgtggacgtatttcttcaggcggttgctgaagaatccc
agctactatggattggagacgttggatgcggctgatgtcaatcattatttgtcgggcttg
gttgagaagtcgctgaaaacgctcgaggatgcgttctgtgtgacattcgaagaggatgag
agaggagtattgccgacatcgatggggcgcatttcgtcatactactacttgtcgcacatg
acgatgctgcacttgaggaacaatctgagtccaacgctgtcctggcaacagctgctggat
gtcatgtgcaaagtgcatgagtacagtcagctgcctgtcaggcacaatgaggacatcttg
aatgggaacctggcaaaagaatgtcctctgccggtcgaccagttgactcttgactcgccg
cacacaaaggcgttcctgctgctgcaggcctacttcagtcgtattccaatgccttgcacc
gactataacactgatctcaagtcggttctcgatcaagcaatacgtattcttcaggcgatg
atagacgtgagcgcggaacaagggtggctggcgacaacactgcgactgcagcagctgatg
caaagtgtagtgcagggtcgctggctgaaggactcccccctcaccacgctgccccacctc
agccccgccctcatgcggctgttcaggcgacaccgcaagtgggccatgctgcccgcactc
ttgcgcatccgctacaagggcctggtcgccatcttgtcggcccagttgactgaggccgag
atcgagcagatctacaaagtgctgcaagacctgcccgacataagaatgtcggttgcgttg
agaggaagctggaaagatgctggaagtgatgaagaggaaaaggttttggacaagactgat
ctagcttcgggcgagtgcgtgttgtcgagcagaacttcgctggtggctgggcaagagtac
actctctgtgtcaagttcgccaagctcaatccctccaaagagagaaaagcgcatgcacca
cgtttttcaaagccgacagagcctggctggttcttgacgttgggcagcattgaacaaaaa
gagttaatcgccatgaaacgagttccaccgatttcttcccgttgtacgcatcagctcacc
tttactgcgccacaagttccaggcagagcgcagttggctttgtacctgatgtctgatacg
tacctaggacttgaccaacagtacacactggactttgatatttcatgctga
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integrated database retrieval system
