Nilaparvata lugens (brown planthopper): 111047842
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Entry
111047842 CDS
T07276
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03440
Homologous recombination
nlu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111047842
03450 Non-homologous end-joining
111047842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlu03032
]
111047842
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111047842
DNA replication proteins [BR:
nlu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111047842
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111047842
BRCA1-C complex
111047842
NHEJ (non-homologous end-joining)
MRX complex
111047842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
SbcC_Walker_B
AAA_15
AAA_29
DUF5631
AAA_5
NACHT
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111047842
NCBI-ProteinID:
XP_039293253
LinkDB
All DBs
Position
11:44525906..44601557
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AA seq
1312 aa
AA seq
DB search
MSRLDRLQIRGIRSFGPETEDVGEIKFQSPLTLILGQNGCGKTTIIEALKFAICSEQPPN
SKSKNGGSAFVHDPKLGNSSETMALIKLRIFDVHSKPVVVSRTMKNTQKLKSMEFKTIDQ
TITYEKNTISNRCIDTDEQMCNFIGVSKPILNYVIFCHQEQSCWPMEEGKTVKERFDQIF
DADKYNKCLEKIRKMRSTRVTENRLTAKDVEYLKDNWETALQYKEKLETEQAKLVACENT
MEACARELSKVEDKLKVVKKKEMNITELIAQKTADTRILESLKKSLDEIVEGLPMGEFAG
NDEELEDAIKSFNLDFDEKKKKLQEIEAQIKNMDSSEKLMQSKLSAQQVKLGKLKRDQDA
YKDMVQQRNDAFNKLAMAVGISDSGPSTPGSSCTSFDTSMEEVEDKIRELRSEVERQKGE
ADRREKSEQDGVDAIRREQAKLEQTKQLKTDQLNKAKLDMKKVVADLEEVGQSSKNLTAL
DNRLKRVVAEIKSESEGVDVSAMDSEIKTLQTKITEIEDEMLEVNKEIDDLIEVSNLQTS
LDSCVERKAAIDSEVDRLKAKTQDILKHLLKEXPEKNVKNHLDLYLSNLTHNITSTQKRI
AEKQTELTKLESKRQHTDEKLRTSRRTLLADEEELQNICLDQDYEEVVNTTTEALKRVQD
DTGTLKSSMVMFRKYIAKLQEPRPCCPLCTRTFSADQEALELARSLETKLENVPRRLVSS
TEEQNRLEEKLTRLQQLRPVYQRVSQLKDTDLPQFNEELSAVSEQIKALTEEIAAIEGDL
EIGLKQDENLAKGIQVDVINLDQKMLEARNIEKEIENLRAKIPTTGSTLSQARNKREELQ
EKLESARKSVESIQAKKTTHVNKINKLTTDQNEIVKEQLKVEKGVQQMKQLMDKKCELKE
LESSLSDQIEKLSNEEFPIKQKLEAAEREKNEHKRTSRNAIERENNKLKSIEQQNVDVQK
LNSKVLQFERQKINQQLEEIEKEISQLTRTIDSRAQNKVTLLSQKDMAKADISNQDARHR
DLNDNKNLRKKRKEAEELENRLKDLETNIGDLDFEQIIQESAELEFKYDNLKEKKNQAFG
TKREIESKVKEVKADLAKPQFKNALKDYKEKLIDHKVQEAVIKDLGAYYLAMDWALKKTH
TERMRTINVIIRDLWRNIYVGNDIDYIEIKTSDDEIKDADKRRDFNYRVVQVKNGTELDM
RGRCSAGQKILASIIIRLALAETFSTNCGVITLDEPTTNLDRDNVISLCNALINLVSSRA
TQKHFQMIIITHDEDFIARLTREEKVNCFWKVYRDNKGLSKIIKCDPIRMNE
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtctagaccgtctccagatcaggggcatacgtagcttcggccccgaaacggaa
gacgtgggcgaaatcaaattccagtcgcccttgaccctgattttgggccaaaatgggtgc
ggcaagaccaccatcatagaagccctcaaatttgcgatttgcagcgagcagccgcccaat
tcgaaatcgaaaaatggcggcagtgctttcgtccatgatccgaaattgggcaattcgtcg
gaaacgatggcactgatcaagttgaggatctttgacgtccatagcaaacctgtggtggtg
tcaaggactatgaagaacacgcagaaactgaaaagcatggagttcaagactatcgaccag
actattacttatgagaaaaacacgattagcaacagatgtattgacactgatgagcagatg
tgcaacttcattggagtttcaaagccaattctcaactatgtcattttttgccaccaagaa
caatcgtgctggccaatggaagaaggcaaaacagttaaggagcggttcgatcagatattc
gacgcagataaatacaacaaatgtttggaaaagatacggaaaatgagatcaacgcgagtc
actgaaaatcggctgaccgccaaagatgtggaatacttgaaggataactgggagacagct
ttgcagtataaggagaaactggagacagagcaggccaaattggtcgcctgtgaaaacacc
atggaagcgtgtgctcgcgaactctcaaaggttgaagacaaactgaaagtggtgaaaaag
aaagagatgaatataacggaactgatagctcagaaaacggccgacacgaggattctggaa
tcgttgaagaaatcactggatgaaatagtcgaaggtcttcctatgggggagttcgctggt
aatgatgaggaattggaggatgccataaagtcgttcaatttggatttcgacgagaagaag
aagaagctgcaagaaatcgaagcccaaatcaagaatatggactcttctgagaagctgatg
cagagtaaactgagcgctcagcaggtgaaacttggcaaactgaagcgggaccaggacgcc
tacaaggatatggtgcaacaacgcaatgacgcattcaacaaactggctatggccgttggc
attagtgattcgggcccatccacaccgggcagttcgtgcaccagtttcgacacgtccatg
gaagaggtggaggataaaattcgcgagctgcgatcggaggtggagagacagaaaggggag
gcggacaggagagagaagagtgagcaggatggggtggatgccataaggcgggaacaggca
aagctggaacagaccaagcaactcaagacggatcagctgaataaggctaaactggatatg
aagaaggtggtcgctgatcttgaagaggtagggcaatcttcgaagaatttgacagcattg
gataatcgattgaaacgcgtggtggccgaaatcaaatcggaatctgaaggtgtggacgta
agcgctatggactctgaaatcaaaacactgcaaacaaaaattactgaaattgaagatgag
atgttggaagtgaataaagagatagatgatctgattgaagtgagcaacctgcagacatcg
ttggattcatgtgtcgaaaggaaagcggcaatcgattcagaagttgatagactgaaagct
aaaacacaggatatcttgaaacatctattgaaagaanatcctgagaagaatgtgaagaat
catctggatttatatttgtcgaacttgacacacaacatcacgtcaacccagaaacgaatc
gcggagaaacagactgagctgacaaaactggagagtaagaggcaacacacggatgagaag
ctgcgaaccagtcgacggacgctgttagcagacgaagaggaactgcagaacatctgtctc
gatcaggactacgaagaggtggtcaatactaccacggaagcgctcaagagagttcaggat
gacacaggcaccctgaagtcgtcgatggtaatgtttagaaagtacatagccaagctgcag
gaaccacgaccttgctgtcccctctgtacgaggacgttcagtgcggaccaggaggcttta
gaactggctagatcgttagagacaaaactggagaatgtacccaggcgactggtgtcatcg
acggaagaacagaatcgactggaagagaagctaaccagattacagcagttgagacctgtc
taccaacgagtcagtcagcttaaagacaccgatttacctcagttcaatgaagagctgagc
gccgtttcggagcaaatcaaggcgctgactgaggaaatagcagccattgaaggtgacctg
gagattggactcaaacaggacgagaacctcgccaaaggcatccaagtggatgtcatcaac
ctggatcagaaaatgttggaggccagaaacattgaaaaggagattgaaaatttgcgggca
aagataccaactactggttctaccttatcacaagctcgcaataaacgtgaggagctacaa
gaaaaactggaatcggcaaggaaatcggtggagagtatccaggctaagaaaaccactcat
gtcaataaaatcaacaagcttaccactgaccaaaacgaaattgtcaaagaacaactcaag
gtggagaaaggtgtacaacaaatgaaacagctgatggacaagaaatgcgaactgaaggaa
ttggagagttcgctgagtgaccagattgagaagttgtcgaatgaagagtttcccatcaaa
cagaagctggaggcggctgagagagagaagaacgaacacaagcgtaccagtcgtaatgct
attgagagagaaaacaacaagctgaaatcgatcgaacagcaaaacgtggacgtgcaaaag
ttgaacagcaaagtgttgcagtttgagcgacagaagatcaaccagcagttggaggagata
gagaaggagataagccaattgacaaggaccattgacagtcgtgcccagaacaaggtgacc
ctgctatcgcagaaggatatggcaaaggctgatatatccaatcaggatgctcggcaccgt
gacctgaacgacaacaagaatttgaggaaaaagcgtaaagaagcagaggaactggaaaac
cgattgaaagatttggaaacgaatatcggcgatttggattttgagcaaataatacaagag
tcggccgagttggaattcaaatacgataacctgaaagagaagaaaaatcaagctttcggt
acgaaacgtgaaattgaatcgaaagtgaaagaggttaaagctgatcttgcgaagccccag
tttaagaatgccttgaaggattacaaggaaaaactgatcgaccataaagtgcaggaagca
gtgatcaaagacctgggcgcttactacctggcaatggactgggctctgaagaagacacac
actgagcgcatgcgcacaatcaatgtgatcattcgcgacctatggcgcaacatctatgtc
ggcaacgacattgactacatcgagatcaaaactagcgacgacgagatcaaagatgctgac
aagaggagagatttcaactacagggtggtccaagtcaagaatggaacggaactggacatg
cgtggacggtgtagtgccggccaaaagatcttggcgtcgataataattcgcctggcgttg
gcggagacgttcagcacgaattgcggagtgatcaccctggacgagcccaccaccaacctc
gacagagacaatgtgatcagcctctgcaacgctctcatcaaccttgtctcgtctagagcg
acacagaagcactttcagatgataatcatcactcacgatgaggactttatcgcgcgtctc
acccgggaggagaaggtgaactgtttctggaaagtgtacagagataataaaggactgtcc
aagatcatcaagtgtgatcctataagaatgaatgaatga
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integrated database retrieval system
