Nilaparvata lugens (brown planthopper): 111049060
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Entry
111049060 CDS
T07276
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu04512
ECM-receptor interaction
nlu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111049060
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111049060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlu04147
]
111049060
00536 Glycosaminoglycan binding proteins [BR:
nlu00536
]
111049060
Exosome [BR:
nlu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111049060
Glycosaminoglycan binding proteins [BR:
nlu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111049060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111049060
NCBI-ProteinID:
XP_039279171
LinkDB
All DBs
Position
3:complement(20476232..20553026)
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AA seq
1858 aa
AA seq
DB search
MRPWLQRRILLWQSVIWLTLGYTVVDAQQNWWEDTNNNQRAEERRVNQWDNRLNEDDTSR
QWRERGERPRPPAPPPVYDNSWRESQSPPAAYDSRGQSAPGGYDSRGQAVPGGYDSRGQA
APDRTVGLSNRPDTSNYQIFNQRGDTSPAAQCIPKCFAEKGSRGIPGSAGQDGPEGLRGY
PGPDGLPGPPGEKGDRGPAGARGAKGDRGRTGGYGHPGRDGLPGPTGPAGSPGIPGRDGC
NGTDGAPGLPGLRGETGPRGYPGLGGEKGFKGEPAFSGIFDKGQKGEPGLICLPGPPGNP
GPTGDVGPVGIMGEVGIKGASGPPGLKGEKGNMGIGYEGRQGEKGNKGETGPPGLPAPIY
GGGRPTANIGPKGEQGEKGDLGIAGVPGQKGDPGPIGDPGFPGDSGLKGEKGLPGDPGPR
GRDGFSGPPGPQGFKGDRGTDGLPGLEGRPGQKGEPGRDGPTGPRGIQGPQGPPGGAKGR
PGPPGPPGPRGHQGPPGANGLDGEQGEKGDRGPEGPIGGQGVPGFMGPEGYPGEKGVKGE
SGSPGIPGELGARGFQGNIGPQGPPGQPGEKGLSIIGPKGLDGLPGRDGEKGNKGERGYQ
GVRGQPGDSAMGTPGSPGPVGPQGEKGLPGTPGSPGIPGRHGEKGDIGGRCNDCSPGRPG
DKGDRGIDGTPGKEGPRGPPGQHGVPGEVGDIGNPGPPGTPGTPGQTGMPGAPGAQGERG
EPAWIPESLVKGEKGLLGLPGDPGPVGPKGNRGPAGPEGHPGSPGMPGEPGVPGERGFLG
AAGVPGLPGIPGEKGDKGLSIKGEKGNPGPWCRDGEKGDPGLIGRKGEPGRCDFPMDLIS
KGDVGAPGEKGEPGPPGRDGLPGDKGLDGLRGEPGVRGNPGEPGVVGRRGHPGQRGEKGN
MGPMGFPGEQGRDGTPGPPGFRGDKGYKGEAGIPTAGPPGPQGFKGDKGEKGLPGPAGKT
GFAGNPGFAGISGEKGDRGVPGLDGLPGQQGAKGEPGPIGPPGQVGRDGLNGLDGAKGEP
GIPGPMGRQGLPGFPGEKGDRGESGPEGPKGFIGAMGFPGDHGRPGMDGKPGDKGDKGEM
GKQGFPGLPGETGPIGFKGQEGPVGEKGFIGPPGPPGPPGSYGLKGDEGPIGPAGQKGEP
GSASEKGQKGEPGVPGLRGPMGLPGRDGSDGVVGEKGTPGFSYPGALGRKGERGPQGPQG
GKGEPGWPGGQATPGRPGEIGPRGLTGEPGAPGPPGMDGLPGQDGLPGPQGLRGAPGQKG
WTGPAGLPGMNGTKGEPGPIGYPGPVGYPGPLGEKGDRGPTGPIVTVKGDKGEPGVPGFP
GLAGDKGDKGFDGVPGAYGDRGEKGLPGPPGRPGDLGPAGFKGEQGPSGPPGPPGLTMKG
EKGLPGLPGKYGRPGAMGAIGEKGEAGIVGLPGPAGLPGAPGTLGPKGEKGDTGPPGPLG
PPGSDGTPGRFGEPGPEGPRGPPGEPGLFGRIGEKGDIGPMGMKGFDGIPGDKGERGLPG
PMGQTGDTGAQGPKGDRGRDGLPGRDGTFGIKGDKGEPALPPQPGPRGDKGDRGFPGKPG
APGADGMDGMDGLVGPKGEQGPPGRNCLAGEPGLPGDKGEPGVRGLPGLRGEQGLVGDAG
IPGQPCSEQRDYMTGILLVKHSQAASVPVCYPGHIKLWDGYSLLYIEGNEKAHHQDLGFA
GSCVRKFSTMPFLFCDMNNVCNYASRNDKSYWLSTNSPIPMMPVEETGIREYISRCVVCE
APANVIAVHSQSVEVPDCPEGWGGLWMGYSFVMHTAAGAEGGGQSLSSPGSCLEDFRATP
FIECNGARGSCHYFANKLSFWLATIELQDQFRAPEKKTLKAGYLRTRVSRCQVCIRNT
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgtggctgcaacggaggatactcctctggcagtcggtgatatggttaacgttg
ggatacacagtagttgatgctcagcagaattggtgggaagacacgaataacaatcagcga
gcagaggagaggcgagtgaaccaatgggacaacagactaaacgaggatgacacctcgcgg
cagtggcgggagaggggggagcgaccgcggccccccgcgccaccccctgtctacgacaac
tcttggcgggaatcacagtcgccgcccgcagcctacgatagcagggggcaatcggccccc
ggcggctacgatagcagggggcaagcggtccccggcggctacgatagcaggggacaagcg
gcccctgatcggacggtgggcctcagcaatcggcctgacacctccaactaccagatattc
aatcaacggggcgacacctcgcctgccgcacagtgtataccgaaatgctttgccgagaaa
ggtagcaggggtataccagggagtgctggacaagacggcccagagggtttgagaggatac
cctggaccagatggtttgcccggtccacctggagaaaaaggagacaggggtccagcaggg
gcaagaggtgccaagggagataggggtaggacaggcggctacggacatcccggacgtgat
ggcttgccaggacctactggacctgccggaagtcccggcataccaggacgtgatggctgc
aacggaaccgatggagctccaggacttcctggtctcagaggagaaactggacccaggggt
tatcctggtctcggaggggagaaaggattcaagggagaaccggctttctctggaatattc
gacaagggacaaaagggagagcctggactgatatgtctgcctggacctcccggaaatcct
ggtccaactggagatgtcgggcctgttggaataatgggtgaagttggaataaagggtgct
agtggacctccaggattgaaaggcgagaaaggtaacatgggaattgggtacgagggacgt
cagggcgagaagggaaataagggagagacgggaccgccgggtctccctgcccctatctac
ggtggaggtcgccccactgccaacatcggaccaaaaggagaacagggagaaaagggtgat
ctgggaattgctggagtacctggacaaaagggtgacccaggaccaatcggcgatcctgga
ttccctggtgattctggactgaagggtgaaaagggtttgcctggagatccaggtcctcga
ggtcgagacggattctctggaccaccaggtccccaaggattcaagggagacagaggcact
gacggtttgcctggattagagggaagaccaggacagaagggagaaccgggacgggatgga
cctacaggaccccggggtattcaaggaccccaaggaccacctggtggagcgaaaggacgt
ccaggaccccccggtcctccaggacccagaggacatcaaggacctccaggagccaacgga
cttgacggagaacaaggagaaaagggagacagaggacctgagggacctattggaggtcag
ggcgttcctggtttcatgggccctgaaggttatcctggagagaagggagttaagggagag
tcagggtcaccaggaattcctggagagttgggtgcaagaggcttccagggtaacatcgga
cctcaaggtccgcctggacaacccggtgaaaaaggactctctattataggaccgaaagga
ctggatggactgccaggaagagatggcgagaaaggaaataagggagagagaggatatcaa
ggagtgagaggacagcctggagactcagcgatgggaactccaggttctccagggccagtt
ggaccgcagggagagaagggtcttcctggaacaccgggatcgcctggaattccaggtcgc
cacggagagaaaggagacatcggcggcagatgcaacgactgctctcccggtcgtcccggc
gataagggagaccgcggcatagatggcacgcctggcaaggagggtcctaggggtccgccc
ggacagcacggcgttcctggagaagtcggtgacattggcaaccctggtccacccggaacc
cccggaacacctggtcaaacaggtatgccgggagcgccaggtgcgcaaggagaacgcggt
gagccggcctggatacccgagtcactggtgaagggcgagaaaggtctactcggtctacca
ggtgacccgggtcccgtaggacctaaaggtaacagaggacctgcaggtcccgaaggccat
ccaggatcacctggaatgccgggtgaacctggagttccgggagagagaggtttcctcgga
gctgctggagtccctggactgccaggtattcctggtgagaaaggagacaaaggactgtcg
ataaagggagaaaaaggtaatccaggaccttggtgccgtgatggagagaagggagatcct
ggactgatcggaaggaaaggagaaccaggaagatgtgatttcccgatggatctgatcagt
aaaggagacgttggtgcccccggagaaaagggagaacccggacctcctggcagagatgga
cttccaggagacaagggacttgacggtctaagaggagagccaggtgtgagaggaaatccg
ggagaaccgggagtggtgggcagaagaggtcacccaggtcagcggggtgagaagggcaac
atgggtcccatgggattcccaggcgaacagggacgtgatggaacacctggacctcctgga
ttccgtggagacaagggttacaagggagaagctggaattcctactgctggaccaccagga
ccgcaaggattcaagggagacaagggtgaaaaaggacttccgggaccagcaggaaaaaca
ggattcgctggaaatccaggattcgctgggatttcgggtgaaaagggtgaccgtggtgtt
cccggtctggatggacttcccggtcagcagggtgccaagggagagccgggtcccatcggg
ccaccgggccaggtaggacgagatggattgaatggactggacggagctaaaggtgaaccc
ggtatacctggaccaatgggtagacaaggattgcctggattcccaggagaaaagggagat
agaggagaatctggacctgaaggacccaaaggattcattggagcaatgggattcccaggt
gaccatggcagacctggaatggacgggaaaccaggagacaagggagacaagggtgagatg
ggcaagcaaggtttccctggacttccgggtgaaactggaccgatcggtttcaagggacag
gaagggccagtgggagagaagggcttcatagggcctcctggacccccagggcctccggga
tcgtatggtcttaagggagatgaaggacctatcggacctgctggtcaaaaaggtgagccg
ggctcagcgtctgagaagggccagaagggagagccgggagtgccaggcctgcgaggcccg
atgggactgcccggccgtgacggcagcgacggcgttgtcggcgagaagggcacgcccggc
ttcagttatccgggtgcactcggccgcaagggagaacgtgggccacagggaccgcagggc
ggcaaaggagagcccggctggcccggcggacaggcaacgcccggacggcctggagagatc
gggccacgtggattgactggtgaaccgggagctccaggacccccaggaatggacggacta
ccaggccaggacggactccccggaccgcaaggattgagaggcgcccccggacagaaggga
tggaccggaccggcgggtctgcctggcatgaacggaaccaagggagagcccggaccaatc
gggtaccccggacctgtcggctatccaggacccctgggagagaagggagaccgtggtccg
acaggacccattgtcacggtcaagggagataagggtgaacctggtgttccgggattccct
gggttggctggagataagggtgataagggctttgacggtgtgccgggagcttatggagat
cggggagagaagggacttccgggccccccgggacgacccggagatcttggtccagctgga
ttcaaaggtgaacaaggaccttcaggaccgcctggacccccaggactgacaatgaagggc
gagaaaggattgcctggtcttccaggaaagtatggccgacctggagctatgggagctatc
ggagagaaaggtgaagcaggaatcgtaggcttgccaggtcccgcaggattgccgggtgct
ccgggaactctcggtccaaagggagaaaagggtgatacaggacctccaggaccgctgggt
cctccaggatccgatggaacacctggcaggttcggagagccaggacccgaaggaccccga
ggtcctcccggggaaccgggactgttcggacgtattggtgagaagggagacataggcccc
atgggaatgaaaggattcgacggaataccgggagataagggcgagcgaggtttgccaggc
ccaatgggacagacgggtgacacgggcgctcagggcccgaagggagacagaggtcgcgac
ggactgccaggaagggacggcactttcggaatcaagggagacaagggagagcccgccctt
cctccacaaccaggtcccaggggtgacaagggtgacagaggcttccctggcaaacccgga
gcaccgggagcagatggaatggatggaatggatggtctggtcggacccaaaggagagcag
ggaccaccgggaaggaattgtttggctggagaaccaggacttccgggagataagggagaa
cctggagtcagaggattgccaggacttaggggtgaacaaggattggttggtgacgcaggt
ataccaggtcaaccatgctcagaacaaagagactacatgactggaatcctgctggttaag
cacagtcaagctgcgtccgtaccagtttgctatccaggacatatcaaactatgggatggt
tacagtttgctctacattgaaggaaacgagaaagcacatcatcaagacttaggctttgct
ggttcatgtgttaggaagttctcaaccatgccattcctgttctgtgatatgaacaacgtg
tgcaattacgccagcagaaacgacaagtcatactggttgagtaccaactcgccgatacct
atgatgcccgtagaagaaactggaattagggaatacatctcacggtgtgtagtgtgtgaa
gcaccagccaatgtgatagctgtccatagtcaaagtgttgaagtaccagactgtccagaa
ggctggggcggtctctggatgggatacagttttgtcatgcacacagcggcaggcgcagag
ggcggcggccaatcgctgtcgagtcccggctcgtgcctggaggacttcagggcgacgccg
ttcatcgagtgcaacggagcgcgaggctcgtgtcactacttcgccaacaagctcagcttc
tggctggccaccatcgaactgcaggaccagttccgcgcgcccgagaagaagacgctcaag
gccggctatctgcgcacgcgtgtcagtcgctgtcaagtctgcatcagaaatacctag
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