Nilaparvata lugens (brown planthopper): 111049060
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Entry
111049060 CDS
T07276
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu04382
Cornified envelope formation
nlu04512
ECM-receptor interaction
nlu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111049060
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111049060
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111049060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlu04147
]
111049060
00536 Glycosaminoglycan binding proteins [BR:
nlu00536
]
111049060
Exosome [BR:
nlu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111049060
Glycosaminoglycan binding proteins [BR:
nlu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111049060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111049060
NCBI-ProteinID:
XP_039279171
LinkDB
All DBs
Position
3:complement(20476232..20553026)
Genome browser
AA seq
1858 aa
AA seq
DB search
MRPWLQRRILLWQSVIWLTLGYTVVDAQQNWWEDTNNNQRAEERRVNQWDNRLNEDDTSR
QWRERGERPRPPAPPPVYDNSWRESQSPPAAYDSRGQSAPGGYDSRGQAVPGGYDSRGQA
APDRTVGLSNRPDTSNYQIFNQRGDTSPAAQCIPKCFAEKGSRGIPGSAGQDGPEGLRGY
PGPDGLPGPPGEKGDRGPAGARGAKGDRGRTGGYGHPGRDGLPGPTGPAGSPGIPGRDGC
NGTDGAPGLPGLRGETGPRGYPGLGGEKGFKGEPAFSGIFDKGQKGEPGLICLPGPPGNP
GPTGDVGPVGIMGEVGIKGASGPPGLKGEKGNMGIGYEGRQGEKGNKGETGPPGLPAPIY
GGGRPTANIGPKGEQGEKGDLGIAGVPGQKGDPGPIGDPGFPGDSGLKGEKGLPGDPGPR
GRDGFSGPPGPQGFKGDRGTDGLPGLEGRPGQKGEPGRDGPTGPRGIQGPQGPPGGAKGR
PGPPGPPGPRGHQGPPGANGLDGEQGEKGDRGPEGPIGGQGVPGFMGPEGYPGEKGVKGE
SGSPGIPGELGARGFQGNIGPQGPPGQPGEKGLSIIGPKGLDGLPGRDGEKGNKGERGYQ
GVRGQPGDSAMGTPGSPGPVGPQGEKGLPGTPGSPGIPGRHGEKGDIGGRCNDCSPGRPG
DKGDRGIDGTPGKEGPRGPPGQHGVPGEVGDIGNPGPPGTPGTPGQTGMPGAPGAQGERG
EPAWIPESLVKGEKGLLGLPGDPGPVGPKGNRGPAGPEGHPGSPGMPGEPGVPGERGFLG
AAGVPGLPGIPGEKGDKGLSIKGEKGNPGPWCRDGEKGDPGLIGRKGEPGRCDFPMDLIS
KGDVGAPGEKGEPGPPGRDGLPGDKGLDGLRGEPGVRGNPGEPGVVGRRGHPGQRGEKGN
MGPMGFPGEQGRDGTPGPPGFRGDKGYKGEAGIPTAGPPGPQGFKGDKGEKGLPGPAGKT
GFAGNPGFAGISGEKGDRGVPGLDGLPGQQGAKGEPGPIGPPGQVGRDGLNGLDGAKGEP
GIPGPMGRQGLPGFPGEKGDRGESGPEGPKGFIGAMGFPGDHGRPGMDGKPGDKGDKGEM
GKQGFPGLPGETGPIGFKGQEGPVGEKGFIGPPGPPGPPGSYGLKGDEGPIGPAGQKGEP
GSASEKGQKGEPGVPGLRGPMGLPGRDGSDGVVGEKGTPGFSYPGALGRKGERGPQGPQG
GKGEPGWPGGQATPGRPGEIGPRGLTGEPGAPGPPGMDGLPGQDGLPGPQGLRGAPGQKG
WTGPAGLPGMNGTKGEPGPIGYPGPVGYPGPLGEKGDRGPTGPIVTVKGDKGEPGVPGFP
GLAGDKGDKGFDGVPGAYGDRGEKGLPGPPGRPGDLGPAGFKGEQGPSGPPGPPGLTMKG
EKGLPGLPGKYGRPGAMGAIGEKGEAGIVGLPGPAGLPGAPGTLGPKGEKGDTGPPGPLG
PPGSDGTPGRFGEPGPEGPRGPPGEPGLFGRIGEKGDIGPMGMKGFDGIPGDKGERGLPG
PMGQTGDTGAQGPKGDRGRDGLPGRDGTFGIKGDKGEPALPPQPGPRGDKGDRGFPGKPG
APGADGMDGMDGLVGPKGEQGPPGRNCLAGEPGLPGDKGEPGVRGLPGLRGEQGLVGDAG
IPGQPCSEQRDYMTGILLVKHSQAASVPVCYPGHIKLWDGYSLLYIEGNEKAHHQDLGFA
GSCVRKFSTMPFLFCDMNNVCNYASRNDKSYWLSTNSPIPMMPVEETGIREYISRCVVCE
APANVIAVHSQSVEVPDCPEGWGGLWMGYSFVMHTAAGAEGGGQSLSSPGSCLEDFRATP
FIECNGARGSCHYFANKLSFWLATIELQDQFRAPEKKTLKAGYLRTRVSRCQVCIRNT
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgtggctgcaacggaggatactcctctggcagtcggtgatatggttaacgttg
ggatacacagtagttgatgctcagcagaattggtgggaagacacgaataacaatcagcga
gcagaggagaggcgagtgaaccaatgggacaacagactaaacgaggatgacacctcgcgg
cagtggcgggagaggggggagcgaccgcggccccccgcgccaccccctgtctacgacaac
tcttggcgggaatcacagtcgccgcccgcagcctacgatagcagggggcaatcggccccc
ggcggctacgatagcagggggcaagcggtccccggcggctacgatagcaggggacaagcg
gcccctgatcggacggtgggcctcagcaatcggcctgacacctccaactaccagatattc
aatcaacggggcgacacctcgcctgccgcacagtgtataccgaaatgctttgccgagaaa
ggtagcaggggtataccagggagtgctggacaagacggcccagagggtttgagaggatac
cctggaccagatggtttgcccggtccacctggagaaaaaggagacaggggtccagcaggg
gcaagaggtgccaagggagataggggtaggacaggcggctacggacatcccggacgtgat
ggcttgccaggacctactggacctgccggaagtcccggcataccaggacgtgatggctgc
aacggaaccgatggagctccaggacttcctggtctcagaggagaaactggacccaggggt
tatcctggtctcggaggggagaaaggattcaagggagaaccggctttctctggaatattc
gacaagggacaaaagggagagcctggactgatatgtctgcctggacctcccggaaatcct
ggtccaactggagatgtcgggcctgttggaataatgggtgaagttggaataaagggtgct
agtggacctccaggattgaaaggcgagaaaggtaacatgggaattgggtacgagggacgt
cagggcgagaagggaaataagggagagacgggaccgccgggtctccctgcccctatctac
ggtggaggtcgccccactgccaacatcggaccaaaaggagaacagggagaaaagggtgat
ctgggaattgctggagtacctggacaaaagggtgacccaggaccaatcggcgatcctgga
ttccctggtgattctggactgaagggtgaaaagggtttgcctggagatccaggtcctcga
ggtcgagacggattctctggaccaccaggtccccaaggattcaagggagacagaggcact
gacggtttgcctggattagagggaagaccaggacagaagggagaaccgggacgggatgga
cctacaggaccccggggtattcaaggaccccaaggaccacctggtggagcgaaaggacgt
ccaggaccccccggtcctccaggacccagaggacatcaaggacctccaggagccaacgga
cttgacggagaacaaggagaaaagggagacagaggacctgagggacctattggaggtcag
ggcgttcctggtttcatgggccctgaaggttatcctggagagaagggagttaagggagag
tcagggtcaccaggaattcctggagagttgggtgcaagaggcttccagggtaacatcgga
cctcaaggtccgcctggacaacccggtgaaaaaggactctctattataggaccgaaagga
ctggatggactgccaggaagagatggcgagaaaggaaataagggagagagaggatatcaa
ggagtgagaggacagcctggagactcagcgatgggaactccaggttctccagggccagtt
ggaccgcagggagagaagggtcttcctggaacaccgggatcgcctggaattccaggtcgc
cacggagagaaaggagacatcggcggcagatgcaacgactgctctcccggtcgtcccggc
gataagggagaccgcggcatagatggcacgcctggcaaggagggtcctaggggtccgccc
ggacagcacggcgttcctggagaagtcggtgacattggcaaccctggtccacccggaacc
cccggaacacctggtcaaacaggtatgccgggagcgccaggtgcgcaaggagaacgcggt
gagccggcctggatacccgagtcactggtgaagggcgagaaaggtctactcggtctacca
ggtgacccgggtcccgtaggacctaaaggtaacagaggacctgcaggtcccgaaggccat
ccaggatcacctggaatgccgggtgaacctggagttccgggagagagaggtttcctcgga
gctgctggagtccctggactgccaggtattcctggtgagaaaggagacaaaggactgtcg
ataaagggagaaaaaggtaatccaggaccttggtgccgtgatggagagaagggagatcct
ggactgatcggaaggaaaggagaaccaggaagatgtgatttcccgatggatctgatcagt
aaaggagacgttggtgcccccggagaaaagggagaacccggacctcctggcagagatgga
cttccaggagacaagggacttgacggtctaagaggagagccaggtgtgagaggaaatccg
ggagaaccgggagtggtgggcagaagaggtcacccaggtcagcggggtgagaagggcaac
atgggtcccatgggattcccaggcgaacagggacgtgatggaacacctggacctcctgga
ttccgtggagacaagggttacaagggagaagctggaattcctactgctggaccaccagga
ccgcaaggattcaagggagacaagggtgaaaaaggacttccgggaccagcaggaaaaaca
ggattcgctggaaatccaggattcgctgggatttcgggtgaaaagggtgaccgtggtgtt
cccggtctggatggacttcccggtcagcagggtgccaagggagagccgggtcccatcggg
ccaccgggccaggtaggacgagatggattgaatggactggacggagctaaaggtgaaccc
ggtatacctggaccaatgggtagacaaggattgcctggattcccaggagaaaagggagat
agaggagaatctggacctgaaggacccaaaggattcattggagcaatgggattcccaggt
gaccatggcagacctggaatggacgggaaaccaggagacaagggagacaagggtgagatg
ggcaagcaaggtttccctggacttccgggtgaaactggaccgatcggtttcaagggacag
gaagggccagtgggagagaagggcttcatagggcctcctggacccccagggcctccggga
tcgtatggtcttaagggagatgaaggacctatcggacctgctggtcaaaaaggtgagccg
ggctcagcgtctgagaagggccagaagggagagccgggagtgccaggcctgcgaggcccg
atgggactgcccggccgtgacggcagcgacggcgttgtcggcgagaagggcacgcccggc
ttcagttatccgggtgcactcggccgcaagggagaacgtgggccacagggaccgcagggc
ggcaaaggagagcccggctggcccggcggacaggcaacgcccggacggcctggagagatc
gggccacgtggattgactggtgaaccgggagctccaggacccccaggaatggacggacta
ccaggccaggacggactccccggaccgcaaggattgagaggcgcccccggacagaaggga
tggaccggaccggcgggtctgcctggcatgaacggaaccaagggagagcccggaccaatc
gggtaccccggacctgtcggctatccaggacccctgggagagaagggagaccgtggtccg
acaggacccattgtcacggtcaagggagataagggtgaacctggtgttccgggattccct
gggttggctggagataagggtgataagggctttgacggtgtgccgggagcttatggagat
cggggagagaagggacttccgggccccccgggacgacccggagatcttggtccagctgga
ttcaaaggtgaacaaggaccttcaggaccgcctggacccccaggactgacaatgaagggc
gagaaaggattgcctggtcttccaggaaagtatggccgacctggagctatgggagctatc
ggagagaaaggtgaagcaggaatcgtaggcttgccaggtcccgcaggattgccgggtgct
ccgggaactctcggtccaaagggagaaaagggtgatacaggacctccaggaccgctgggt
cctccaggatccgatggaacacctggcaggttcggagagccaggacccgaaggaccccga
ggtcctcccggggaaccgggactgttcggacgtattggtgagaagggagacataggcccc
atgggaatgaaaggattcgacggaataccgggagataagggcgagcgaggtttgccaggc
ccaatgggacagacgggtgacacgggcgctcagggcccgaagggagacagaggtcgcgac
ggactgccaggaagggacggcactttcggaatcaagggagacaagggagagcccgccctt
cctccacaaccaggtcccaggggtgacaagggtgacagaggcttccctggcaaacccgga
gcaccgggagcagatggaatggatggaatggatggtctggtcggacccaaaggagagcag
ggaccaccgggaaggaattgtttggctggagaaccaggacttccgggagataagggagaa
cctggagtcagaggattgccaggacttaggggtgaacaaggattggttggtgacgcaggt
ataccaggtcaaccatgctcagaacaaagagactacatgactggaatcctgctggttaag
cacagtcaagctgcgtccgtaccagtttgctatccaggacatatcaaactatgggatggt
tacagtttgctctacattgaaggaaacgagaaagcacatcatcaagacttaggctttgct
ggttcatgtgttaggaagttctcaaccatgccattcctgttctgtgatatgaacaacgtg
tgcaattacgccagcagaaacgacaagtcatactggttgagtaccaactcgccgatacct
atgatgcccgtagaagaaactggaattagggaatacatctcacggtgtgtagtgtgtgaa
gcaccagccaatgtgatagctgtccatagtcaaagtgttgaagtaccagactgtccagaa
ggctggggcggtctctggatgggatacagttttgtcatgcacacagcggcaggcgcagag
ggcggcggccaatcgctgtcgagtcccggctcgtgcctggaggacttcagggcgacgccg
ttcatcgagtgcaacggagcgcgaggctcgtgtcactacttcgccaacaagctcagcttc
tggctggccaccatcgaactgcaggaccagttccgcgcgcccgagaagaagacgctcaag
gccggctatctgcgcacgcgtgtcagtcgctgtcaagtctgcatcagaaatacctag
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