Nilaparvata lugens (brown planthopper): 111049144
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Entry
111049144 CDS
T07276
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111049144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111049144
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111049144
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111049144
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
111049144
NCBI-ProteinID:
XP_039288758
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Position
7:43650088..43686700
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AA seq
600 aa
AA seq
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MCHYIKWPGIAFLLIRNGPALRAPPAQMITSQQMMSFLLRLANWRNEWDSFCHGIYIALD
LVGVRYRTVDGHNYHLSSDYNSSPYILPCPIDFNFFVWSFRPLTPFKKSRHDEVWKFCNN
FGNHTPAKIAAIYTAMRSAMATTLLASYNITIRDILQPNFYRGNPGTPGSVIERHGELWF
SKKLRSMFQYFFGLVLDGGYYCYYWWNYDYRRDCCGGAHAERCFGGMNANLPPYWFSPLV
VDDFLLTRPLEWGIVGPFPKVDLEEDLMCHGPDKVGMVKQPTSESSEFTMSSEDFPALPG
TSTASSQSGGGSQSAVGSAGAVGAVGQGVANADTTPVSQQGVATGVNQHSTSSLNMTLDK
GGGGGVGLEGVGVDATGGGGERMSTPHDKALLQKRGIQTSPDGKVTNIPASMVKDQFGMV
GLLTFIRAAETDPNLVSLALGQDLTALGLNLNSPDNLYPTFGGPWADMPCRPQDIDCLVP
PEYLINHGIREKLAQIKLGRYKDDVLFYMFYTNVGDFLQLAAAAELYQREWRYHMEEKVW
ITQAPGLGAVEKTSTYERGTYYFFDAQNWRKVPKEFHLDYSKLENRPILPSSNLPLQQPV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcactacatcaaatggccaggcatagctttcctcttgataaggaatggtccggct
ttgagagctcctcctgctcaaatgataacctctcagcagatgatgtccttccttctacga
ctagctaattggagaaacgaatgggactcattctgccatggtatctacattgccctcgat
ctggtgggtgttcgatataggactgtagatggtcacaactatcatctatcatctgattac
aattcctctccctacatacttccatgtcctatagatttcaattttttcgtatggtccttc
aggccattgacgccattcaagaagtctagacatgatgaggtgtggaagttttgcaacaat
tttggcaatcatacccccgcaaaaatcgctgccatctatacagctatgcggtctgcaatg
gctaccaccttgctggctagttacaacatcaccattcgggatatattacaacccaatttt
tatcggggaaatccgggcacacctggtagtgttattgaaaggcatggtgagctctggttc
tcaaagaaattacgcagtatgttccaatatttttttggtttggtgttggatggtggttac
tattgttactattggtggaattatgattatcgccgggactgttgtggaggtgctcatgct
gaacgttgttttggtggtatgaatgctaatttgcctccgtactggttttcaccattggtt
gtagatgatttcctactgacaagaccacttgaatggggcattgtgggtccctttcccaag
gtggaccttgaggaggacttgatgtgtcacggacctgataaagttggaatggtgaagcag
ccgacatctgaatcgagcgaattcacaatgagcagcgaagacttcccggcgttgcccggc
acaagcaccgcctccagccagagcggaggcggcagccagagtgcggttgggtcggcaggc
gccgtgggggccgttggacaaggggtggcaaatgccgatacgacgccagtatcgcaacaa
ggtgtggcgacaggagtgaaccaacattcgacgtctagcctgaacatgacgctggacaag
ggcggaggcggaggggtgggcttggagggggttggggtggatgcgacggggggaggtggc
gagcggatgagcaccccccatgacaaggccctgctgcaaaaacggggcattcagacctcg
cctgacggcaaagtgacgaacatcccagcgagcatggtgaaagaccagttcggcatggtg
ggcctgttgacgttcatccgggcggccgaaacggacccgaacctggtgtcgctggccctc
ggtcaggacctgaccgcccttggcctcaacctgaactcgcccgacaacctctaccccacg
ttcggggggccctgggcagatatgccttgtcgaccgcaggacatcgactgccttgtgccg
cccgaatacctcatcaatcacggcatcagggaaaaattggcgcaaataaaattaggccgg
tataaagacgacgttctcttctatatgttctacacgaatgttggtgatttcctacaacta
gcagcagcagctgaattataccagcgcgaatggcggtaccacatggaggagaaggtgtgg
atcacacaggcaccaggcctaggcgccgtcgagaagacgtccacctacgagcgcggcacc
tactactttttcgatgcgcaaaactggcgaaaagtgcccaaagaattccacctcgactac
agcaaactcgaaaatcggcccattctgccctcgtccaatctgcccctccagcagcctgta
tga
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