KEGG   Nilaparvata lugens (brown planthopper): 111049710
Entry
111049710         CDS       T07276                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
nlu  Nilaparvata lugens (brown planthopper)
Pathway
nlu03030  DNA replication
nlu03410  Base excision repair
nlu03420  Nucleotide excision repair
nlu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nlu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111049710
   03410 Base excision repair
    111049710
   03420 Nucleotide excision repair
    111049710
   03430 Mismatch repair
    111049710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nlu03032]
    111049710
   03036 Chromosome and associated proteins [BR:nlu03036]
    111049710
   03400 DNA repair and recombination proteins [BR:nlu03400]
    111049710
DNA replication proteins [BR:nlu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111049710
  DNA Replication Termination Factors
   ELG1-RFC complex
    111049710
Chromosome and associated proteins [BR:nlu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111049710
DNA repair and recombination proteins [BR:nlu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111049710
  Check point factors
   HRAD17(Rad24)-RFC complex
    111049710
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_11 AAA_assoc_2 RuvB_N AAA_14 AAA_16 ResIII DUF815 DEAD RCF1-5-like_lid AAA_24 AAA_7 PhoH AAA_30 AAA_5 AAA_19 Mg_chelatase TIP49 AAA_3 DUF1512 BrkDBD ATPase_2
Other DBs
NCBI-GeneID: 111049710
NCBI-ProteinID: XP_022191548
LinkDB
Position
10:10563330..10580532
AA seq 338 aa
MITEEKKNLPWVEKYRPSKLDDLISHDDIIRTINKFIQEDQLPHLLFYGPPGTGKTSTIL
ACAKQLYPKAQFSSMVLELNASDDRGIGIVRGQILNFASTRTIFKSGFKLIILDEADAMT
NDAQNALRRIIERFTENVRFCLICNYLSKIIPALQSRCTRFRFGPLDPTQILPRLDHVIQ
EENVKCTEDGKKALMQLSQGDMRKVLNVLQSTATAFPQVNEETVYTCVGHPLKSDIRKIL
QWLLHDDFKTTYDLIQEMKIAKGLALQDILSEIHLLVHRISLPPDVLINLLIKMSDIEYR
LTSGTSECLQLSALVAAFHMARADLKVPDIEDNIDEND
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgattactgaagagaaaaagaatctaccatgggtggaaaaatatcgaccaagtaaacta
gatgatttaatttcgcatgatgatattataagaactatcaacaaatttatacaagaggat
caactgccccatttattgttttatggacctcctggaactggtaaaacaagtacgattcta
gcatgtgcgaaacaactctatccaaaagcacagtttagttctatggttctggaattgaat
gcatccgatgacagaggtattggaatagtgcgaggccagatattgaatttcgccagtacg
agaaccattttcaaatcgggcttcaaactcatcattcttgatgaagccgacgccatgact
aatgatgctcaaaatgctttacggagaattatcgagaggttcacagagaatgtacgtttc
tgcttgatttgcaattatctgagcaaaataattccagcgctgcagtcccgttgcacgagg
ttcaggttcggtccactcgatcccactcagatcctgcctcgactagatcacgtcatacag
gaagaaaatgtgaaatgcactgaagacgggaagaaggctttgatgcagttgtcgcaaggg
gacatgcgcaaagtgctgaatgtgttgcagagcactgcgactgccttcccacaagtcaac
gaggagactgtctacacatgtgtcggccatcctctcaagtccgacatacgtaagattctt
caatggctgctgcatgatgatttcaagaccacatatgatttaattcaagaaatgaaaata
gcgaaaggattagctctccaggatatattgtctgaaatccatcttcttgtacacagaatt
agcctgccgcctgatgtgctgataaatctgctaataaaaatgtcagacattgagtacaga
ttgacatcgggcacaagtgagtgtctgcagttgtcggcgctagttgcagcattccatatg
gccagggcagatctcaaagtgcccgacatcgaggacaatatcgacgaaaacgattaa

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