Nilaparvata lugens (brown planthopper): 111050484
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Entry
111050484 CDS
T07276
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111050484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111050484
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111050484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
111050484
NCBI-ProteinID:
XP_022192512
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All DBs
Position
6:49578015..49593538
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AA seq
524 aa
AA seq
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MTTQAAGTSSSVQEFSIRVPKNGRKKHHMMRFNSVLNVDFSKWAQVKMERENNMKEFKGP
DDDQPKFGAGSEFGRDAKEEARRKKYGIITKKYRPEDQPWILRVGGKTGKKFKGIREGGV
GENAAFYVFTHAPDGAIEAYPLQEWYNFQPIQRYKALSAEEAEQEFGRRNKAMNYFSLML
RKRLRNEEGEPDEAEDGKTKKTGAKKAKELKISDMDDWVDSEEDNDSDEEEMNEEAKEKK
EKKKKKDQELAKKKKKRKAGSDDSAVEESDDGDEEGRELDYISDSSDSESDLEAKFDKEM
KGVAEESALRKLLTSDEDEDEEDEEGKDKNKEDKDDDKDDKDDANDKDKDKAGAGAKKKK
KKKKVVKKEVDMPGIKAEADSSNDSSPDSSDSEAIDNKLKLQTNSTPNSRSGSPIPGSGS
QDSKRNLSTPNSGEPSSKRVRLDTPGSSLSSGSGGGDTGITEEAVRRYLMRKPMTTTELL
QKFRSRKTGLSSEQLVNVMTQILKRINPVKQTIKNKMYLSIKNF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccaggcggctgggacctcttcatcggtgcaagagttttcaattcgagtgcct
aagaatggccgaaaaaagcatcatatgatgcgattcaattcagtattgaatgttgacttc
tccaaatgggctcaagtgaagatggagcgtgagaacaacatgaaggaattcaaaggccct
gatgatgatcagccaaagtttggagctggcagtgagttcggtcgtgatgctaaagaagaa
gctaggcgtaaaaagtatggcatcatcactaagaaataccggcccgaagatcagccatgg
atactgagggttggcggcaagactggcaagaagttcaagggaattcgcgagggtggggtg
ggagagaatgcggcattctacgtgttcacgcatgcgcctgacggggccatcgaagcctac
cccctgcaggagtggtacaacttccagccgattcagcgctacaaagcactttccgccgag
gaagctgaacaggagttcggaaggagaaacaaagcgatgaattacttttcactcatgttg
cgtaaacgtcttcgcaatgaagagggagaaccggatgaagccgaggatggaaaaacaaag
aagactggagctaagaaagcaaaagagttgaaaatttccgacatggacgactgggtggac
tctgaagaggacaacgattcagatgaagaagaaatgaacgaagaagccaaagagaagaag
gaaaagaagaagaagaaagatcaagaactggcgaaaaagaagaagaagcggaaagcaggc
tctgacgattcggcagtagaggaaagtgatgatggtgatgaagaagggagggaacttgac
tatatatccgactcttctgatagtgaatcggacctggaagcgaaattcgacaaagagatg
aaaggagtcgccgaggagagtgcactgaggaaactgctcacctcagatgaggatgaagac
gaagaggacgaagaaggaaaggataagaacaaggaagacaaggatgacgataaggatgat
aaggacgacgccaatgacaaggacaaagacaaggcgggagctggtgccaaaaagaaaaag
aagaagaagaaagtggtgaagaaggaggtggatatgccgggtatcaaagctgaagctgat
tcttccaatgactctagtcctgatagttctgattcagaagcaatagacaacaaattgaag
ctgcaaactaatagtacaccaaactcgcgtagtggtagtcctattcctggatctggcagc
caagatagcaaacgaaatctgtccactccaaattcaggggagccttcctccaaacgagtt
cgacttgacacacctggttcttcactaagtagcggaagcggcggtggagacactggaatt
acagaggaagcggtacgccgctatctgatgcggaagcccatgacgaccacggaacttctg
cagaaattccgcagccgaaaaacgggtctcagctccgaacagctggtcaacgtcatgaca
cagatactgaaacgcatcaaccccgtcaagcaaaccatcaaaaacaaaatgtatctgtct
attaagaacttttaa
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