Nilaparvata lugens (brown planthopper): 111050741
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Entry
111050741 CDS
T07276
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111050741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111050741
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111050741
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111050741
RNA polymerase I system
111050741
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111050741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW2_Spt5
KOW
Spt5-NGN
KOW7_SPT5
KOW6_SPT5
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
CTD
KOW1_SPT5
SPX
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
111050741
NCBI-ProteinID:
XP_039287115
LinkDB
All DBs
Position
6:51577154..51608902
Genome browser
AA seq
1133 aa
AA seq
DB search
MSDNEDYESGSEAGSRSYQGSDAGSDAGSEVGSPRASDAGSARGSGSGRGSGRGSDAGSY
RGSDSEPENGDARSRSASRSRSRSRSGSPRRSRSRSRSRSRSRSRSRSPSGSEAEEVDGR
EREPSVSDEEEPEGEDLNSEDEFDEEEEEEDEGPRSKKKKKNDRFGGFIIDEAEVDDEFE
DEEEWEEGAQEIGIIGNEMEELGPTAREIEGRRRGTALWDSQKEAEIEEYLRKKYADESI
ASRHFGDGGEDMSDEITQQTLLPGVKDPNLWMVKCRIGEEKATALQLMRKYIAYQGTEPL
QIKSVVAPEGLKGYIYIEAFKQPHVKQAIENVSNLRMGFWKQQMVPIKEMTDVLRVVKVQ
TGLKPKQWVRVKRGLYKDDIAQVDYVDLGQNQVHLKLLPRIDYTRPRGALRTTQVTLCGY
YIYTQNDTGRSNYVATIRCRDGHVEGQFDILVFSANXSFEPNVFEGVKPTLSELEKFEEA
PEGVDIELSATNKEDGPGHSFSAGDNVEVCQGELMHLQGKILAIDGNMITIMPKHEDLTT
PLEFQANELRKYFSMGDHVKVLSGRYEGDTGLIIRVEDNRIVLFSDLTMHELEVLPRDLQ
LCTDMATGVDSLGQFQWGDMVQLDSQNVGVIVRLERENFHILNMQGKLVEAKPQALHKKK
EFRNTVALDYQQATIQKRDIVKVIDGPHAGRSGEIKHLYRSYAFLFSRQYLDNGGIFVCK
TRHLELPTEKRNNNNMNNMNAGFMSPRISSPYHPSGGGGGARGGGGGGRGRGGGGGGVRR
DRDLIGQTIKITGGSYKGNVGMVKDATMTTARVELHSSCQTISVDRSHIASVGTPSKDGS
FTTYSRTPSGGSATPAYQQGSKTPIHGSQTPLYEAGSRTPYGGATPSHDGSRTPGAWDPT
ITNTPARSDMDTFSLDEGGYGGGSGGGGPAGGPYTPQTPGTPGMYGSDPSYSPYPASPSP
TGYHSGSSAYVETPSPSSGVPPYGTPSPVNYSPLADGGGQSPYNPQTPSSGMESPMQEWH
TVDIEVRVRDSQIDAGLARQTGIIKGISGLMCTVFLPDEDRTVSIGCEHLEPVVPMQGDQ
VKVIMGEEREMVGSLISIDNAEGVVKLRSDKFSEPVEVKMLPLRSLCRYKPTG
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaacgaagactacgagagtggaagtgaagctggtagcagaagctaccagggc
agcgacgcgggaagcgatgctggcagcgaggtgggaagtccgcgagcgagcgatgccgga
agtgcccggggaagcggaagcggacgtggaagtggacgcggcagtgatgccggtagttac
aggggcagcgactctgaaccagagaatggagatgcgaggagtagaagtgcttcgaggagt
cgcagccgaagtaggagtggaagtccgaggagaagtaggagtcgtagccgaagtcgtagc
aggagtcgcagccgaagtcgcagccccagtggttcagaagccgaagaagtcgatggaagg
gaacgtgaaccatcagtgagtgacgaagaagaacctgaaggggaggacctgaattccgag
gatgaattcgacgaagaggaagaagaagaggacgagggccctcgcagcaaaaagaagaag
aagaacgacaggtttggcggtttcatcatcgacgaggcggaggtcgatgacgagtttgag
gatgaggaggagtgggaggagggtgctcaggagatcggcatcatcggcaacgaaatggaa
gagttggggccgaccgcgcgcgaaatcgaaggcaggcgccgagggaccgccttgtgggat
tcgcaaaaggaggcggagatcgaagagtacctgcgcaaaaagtacgcggacgagtcgata
gcgtcgcggcactttggcgacggcggcgaggatatgtcagacgagatcacccagcagacg
ctgctgcccggcgtcaaggaccccaacctgtggatggtcaagtgtcgcatcggtgaggag
aaggccaccgcccttcagctcatgcgcaagtacatcgcctatcagggcaccgagccgctg
cagatcaagtcggtcgtggcgcccgaaggactcaaaggctatatctacatagaggcgttc
aaacagccgcacgtgaagcaggcgatcgagaacgtgagcaatctgcgcatgggcttctgg
aagcagcagatggtgcccatcaaggagatgacagatgtgctgcgagtggtgaaggtgcag
acgggcctcaagccgaagcagtgggtgcgagtcaagcgaggtctctacaaggacgacatt
gcgcaggtcgattatgtcgacttgggccagaaccaggtgcatctcaagctgctgcctcgc
attgactacacgcggccacgtggtgccctcagaacgacacaggtaactctatgtggctac
tacatctatactcagaatgacacaggtcgtagcaactatgtagctactatcagatgtagg
gatgggcacgtagagggacagtttgatattcttgtgttctctgcaaactaatcatttgaa
ccaaatgtgttcgaaggtgtgaagccaactctatctgagctggagaagtttgaagaggcg
ccggaaggcgttgacattgagctgtcggccaccaacaaggaggacggacccggccactcg
ttcagtgccggtgacaatgtcgaagtgtgtcagggtgaattgatgcacctgcagggcaaa
atccttgccattgacggcaacatgatcaccatcatgcccaagcatgaagatctaacgaca
cctcttgagtttcaagcgaatgaattgcggaaatacttcagcatgggagaccacgtgaaa
gtattgagtggtcgatacgaaggagatactggactcattattcgagttgaagacaatagg
attgtcctgttctcggatttgacaatgcacgagctggaagttttgcctcgggatttgcag
ctatgtaccgacatggccacaggtgtggactccctcggtcaattccaatggggcgacatg
gtacagttggattcacagaatgttggagtgattgtgagactggagcgagaaaacttccac
attctgaatatgcaaggaaagttagtggaagccaaaccccaggctctgcataaaaagaaa
gagttccgaaacactgttgccctggattatcaacaggccactattcagaaaagagacatt
gtcaaagtcattgatggaccacatgccggacgcagtggtgaaatcaagcatctgtatcgc
agttacgcattcctattttcaagacaatacctggacaatggaggcatattcgtgtgcaag
acaaggcatcttgaacttccaaccgagaagaggaacaacaacaacatgaacaacatgaat
gccggcttcatgtctccacgcatctcgtcgccgtaccacccgagtgggggtggtggtggt
gcaagagggggcggaggaggagggcgtggcaggggaggcggaggaggtggggtgcgcagg
gaccgtgatctcatcggacagactatcaaaatcactggaggatcttacaaaggtaatgtt
ggtatggttaaggatgctacaatgacaactgcacgtgtggaattgcattcgtcttgtcag
acgatatccgtcgacagatctcatattgccagtgtgggaactccttcaaaggacggaagc
tttaccacatacagccgtaccccgtctggtggatcggcgacccctgcctaccaacaaggc
agcaagactcccattcacgggtctcaaacacctctctacgaagctggctcgcgtacaccg
tacggtggcgcgacaccgtcgcacgacggctcacggacaccgggcgcctgggacccgacc
atcacgaacacgccggcacgctccgacatggacacgttttcgctggacgaggggggctac
ggtggtggctcagggggagggggtcctgccggggggccctacacgccgcagacccccggc
acccctggcatgtacggatcggatccgtcatactcgccgtatcccgcgtcgccctcgcct
actggatatcacagtggcagttcagcgtacgtggaaacgcctagtccaagcagtggcgtt
ccgccctatggcactccgtcccctgtcaattacagtccactggctgatggtggaggccaa
tcaccttacaacccacagacgcctagttcaggcatggaaagtccaatgcaagaatggcat
acggttgacattgaggtgagagtaagagattcacagattgatgctggacttgctaggcaa
acaggaatcatcaagggtataagcggcctgatgtgcacagtgttcctgccggacgaggac
cgaacggtgagcattggctgtgagcatctggagccagtggtgccaatgcaaggcgaccag
gtcaaggtcataatgggcgaggagcgcgagatggttggctcgctcatttccatcgacaat
gccgaaggagtcgtcaagctccgctcggacaagttcagcgagcctgtcgaggtcaaaatg
ttgccgctaaggtcactctgtcgctacaagcctactggataa
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integrated database retrieval system
