Nilaparvata lugens (brown planthopper): 111050997
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Entry
111050997 CDS
T07276
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111050997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlu03041
]
111050997
03009 Ribosome biogenesis [BR:
nlu03009
]
111050997
Enzymes [BR:
nlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111050997
Spliceosome [BR:
nlu03041
]
Complex A
U1 snRNP components
U1 related factors
111050997
Complex B
111050997
Ribosome biogenesis [BR:
nlu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111050997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111050997
NCBI-ProteinID:
XP_039283885
LinkDB
All DBs
Position
5:complement(22538904..22555118)
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AA seq
566 aa
AA seq
DB search
MFSTVSKLSATRFCLSTLRSIPCTMSYRGNGMNGRSTNGYGGGGGARNGYGGGGGGGGAR
MSNGYGGGGGYGGGGRGGGFGGKSGQPGGALRKPNWSQLDLPEFSKDFYVPHPNVARRPL
TEVEQYRNSKEITVKGLVPNPIQFFEEASFPDYVMDQVKKQGFDFPTPIQAQGWPIAMSG
RNMVGIAQTGSGKTLAYVLPATVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVAEEFG
SATYVRSTCLFGGAPKGPQARALERGVEIVIATPGRLIDFLERGTTNLQRCTYLVLDEAD
RMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVKKLAEDFLRDYVQINIGSLQLSANH
NIVQVVDVCQEHEKENKLIRLLEQISTQPENKTMIFAETKKKVELIAKGIRRSGWNALSI
HGDKSQQDRDYVLREFRTGRSSILVATDVAARGLDVDDVKFVINYDYPNSSEDYIHRIGR
TGRSDQTGTAYTFFTANNAKQARDLVGVLQEAKQEVPAELVDLARRGGSMGGGRGGRWGY
GGGRGGGGRFNNENRFSGKPAMHRRF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtacagtatcaaagttgtctgctacccgtttctgtttgtcaactctacgatca
ataccttgcacaatgtcttacagaggtaacggaatgaacggccgttcaaccaatggctat
ggtggaggcggcggtgcccgcaacggctatggtggaggcggtggcggaggcggcgctcgt
atgagcaatggctacggaggaggcggtggttatggtggaggcggcaggggaggtggcttt
gggggcaagtcaggacagccgggtggagcccttcgcaaacccaactggagccaactcgat
ctgcccgaattctccaaagacttctatgtgcctcatcctaatgtcgccagaaggcctctt
actgaagttgagcagtacaggaatagcaaggaaattactgtcaagggactcgttccaaac
ccaatccaattcttcgaagaagctagcttcccagactacgtcatggatcaagtcaagaaa
caaggtttcgatttcccgacgccaattcaagctcaaggctggccgattgcaatgagtggc
agaaacatggtgggaattgctcagaccggttctggcaaaactttagcttacgtactgcca
gcgacggtgcacatcaacaaccagcagccgctgcagcgcggcgacgggccgattgcactg
gtgctggcgccgacgcgtgaactggcgcaacagatccagcaggtagctgaagagtttggc
tcagccacctatgtacgcagcacctgtctgtttggcggcgcacccaagggaccgcaggcg
cgcgcactcgagcgtggagtcgagattgtcatcgccacacctggacgcctcattgacttc
ctcgagcgaggcaccaccaacctgcagcgatgcacctacctcgtgctcgacgaggccgac
cgtatgctcgacatgggcttcgagccccagatcaggaagatcatcgaacaaattcggccc
gacagacaagttcttatgtggtctgccacatggccaaaagaagtgaagaaattggctgag
gatttcctccgagattacgtacaaatcaacattggatccctgcagctttccgccaatcac
aatattgtacaagtagtcgatgtttgccaagaacacgagaaagaaaacaaattgattaga
cttttggaacaaatctctacacaacctgagaataagacaatgattttcgctgaaacaaaa
aagaaagttgagctgatcgcgaaaggaataagacgctctggatggaatgcactgtcaatt
catggcgataagagccagcaagatcgtgactatgttctaagagaattccgtacgggcaga
tcatcgatcctggtggcaacagacgttgccgcccgtggccttgacgtagatgatgtgaag
tttgtgataaactatgactacccgaactcgtctgaggactacatccaccggatcgggcga
actggccgttcggaccagacaggcacggcctacacgttcttcacggccaacaacgccaag
caggcgcgcgacctggtgggggtgttgcaggaggccaaacaggaggtgcccgctgaactg
gtcgacctcgctcgtcgtggaggatccatgggtggtggacgaggtggcagatggggatac
ggcggtggccgaggaggcggtggacgcttcaacaacgagaacaggttctccggcaagcca
gcaatgcacaggcgcttctag
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