Nilaparvata lugens (brown planthopper): 111051638
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Entry
111051638 CDS
T07276
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
nlu
Nilaparvata lugens (brown planthopper)
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nlu03037
]
111051638
Cilium and associated proteins [BR:
nlu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
111051638
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
WD40_Prp19
TPR_IFT80_172
Clathrin
TPR_COPA_B
TPR_GEMI5
TPR_8
Hira
TPR_2
TPR_12
ANAPC3
SASA
SAS-6_C_CC_2
Motif
Other DBs
NCBI-GeneID:
111051638
NCBI-ProteinID:
XP_039278693
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All DBs
Position
3:complement(28533707..28607385)
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AA seq
1421 aa
AA seq
DB search
MSLYFDYTVHVEDPVTSVNALAWHPQQALLAIACHSQDIGGSVTICDDLGEGLREVQPAR
AQCAAVGVAWHPARRMLVSAWANGELRVWSGERDFCAAPTKHAAPLYLVLWSHLGGRFIS
VDIGEGLREVQPARAQCAAVGVAWHPARRMLVSAWANGELRVWSGERDFCAAPTKHAAPL
YLVLWSHLGGRFISVDINGVVIGWRVDSRGQLVSVWEQNAGAEVSCVEFRRARPGPDLSR
LARKAVAGDQRALDVFSAWRPRTAGQPPAFAASQDHLACYVATHTGKVLHISESGSCQEV
LNCGNARIKRMLHHEHEDSLIILTDGLSIGHYAVAQDGSLVEVNKVKMSAAGAEGSAAMV
WAGVGLVACAVGSTVVRCWELSSGDSYSLPVQPHDQATANQAITALAYFAQDGTLSACTN
VGNILLWRRSGGGVGDEWEELAGSRVRGHIQACSWGASASLAVCTAAAAFLLRQHELSAA
YTHRVSTVQVSASDLVVSLDGDSAELKTDLKVCGVSVSKDNIVVWSGKTVVVYQSAPLTS
LNVISSFACECECVALLEQSLVVLESKSSHVQVMTFQGTVKQSLTCSSTPIGLHLSSSSS
HLVVWTMSGALHVWDLTRREAKAVCPPKDLMECLDDFGEVICARVNANGSRVSLSVAGVN
LLPLPSVYIWDLESDSLSCHSFSADESFSNETKRFIVNHFWDEQEPRLLVCEAKRLPPDA
SLKSHHTNNQRSPPSDADKHLTVLTSLAYSSTHGILVQDVMPAPEHFVSLLAVDTPHLIV
LVKPTNQQRVTSSKILMKDFEGLENCDSATRAAVHNFSFCLSVGDIDQAFKTIRHVKSVA
VWSNLAKLCVKTRRLDVAGVCLGRMGDARGVAALRDAQAYPQLEARLATLAVHLGLIDEA
EKLFASCGRWDLLNKMLQGLDEWERALRLAEEKDRIHLRHTRHAYARHLEESGDAEAAAD
MYRQADTHRSHVTRMLLDQPHQLEAYVLNSKDPALFKWWAQYMESSGDMELAMKYYKDAG
DDLSMVRVMCFLEEFDRAAEIASRSSDKAACYHLARQYENMGHVQEAVHFFTRATAYANA
IRMCKEQHLDDQLWSLALSAGPREQTEAARHLESTAPDRAVLLYHRAGLFRTALDLYKDG
VSLCWERSVPLTEELAEALTPSQGDPNRAEILEHLAECALMQANYHLATKKFTQAGNKVK
AMKALLKSGDTEKVIFFATVSRQREIYVMAANYLQSLEWQSQPDLLKNIVTFYTKGRAPH
LLANFYTSCAQVEIDEYGNYEKALGALNEAARCLSKDSDQYASVVESVARKTASVKKFLD
IRRMLDRGEAESGLQQCRQLLSAGCDLVRSGDVYSLMIEQATKANDWRTAARLAQELRQA
QPHDNLSLYIPKDIMERLGLDHKQELESHEVDPEEAVEEAV
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctacttcgattacaccgttcatgtggaggatccagtaacatcggtcaatgcc
ttggcttggcatccacaacaagcactgcttgccattgcttgtcactctcaagacattgga
ggcagtgtcactatttgtgatgacttgggcgaaggcctaagagaagtacagccggcgcgt
gcgcagtgcgctgcagtaggcgtggcttggcacccggcacggcgcatgctcgtctcggcc
tgggcgaacggcgaactgcgcgtctggagcggcgagcgcgacttctgtgcggcgccaacc
aagcacgctgctcccctgtatcttgtcctctggtcgcatctcggcggtcgcttcatctcc
gttgacatcggcgaaggcctaagagaagtacagccggcgcgtgcacagtgcgctgcagta
ggcgtggcttggcacccggcacggcgcatgctcgtctcggcctgggcgaacggcgaactg
cgcgtctggagcggcgagcgcgacttctgtgcggcgccaaccaagcacgctgctcccctg
tatcttgtcctctggtcgcatctcggcggtcgtttcatctccgttgacatcaacggagtg
gtgataggctggcgcgtggactcgcggggccaactggtgtctgtgtgggaacagaacgcg
ggcgcagaggtgagctgtgtggagttcaggcgcgcgcgcccaggccctgacctcagtcgc
cttgcgcgcaaagcggtggcgggcgatcagcgcgccctcgatgtcttcagcgcctggcga
cctcgcaccgccggtcagcctccagcctttgccgcctcacaagaccatctcgcctgctac
gtcgccactcacaccggaaaggtgctccacatatcagagagtggaagctgtcaagaagtg
ttgaattgtggcaacgccagaataaagcgaatgcttcatcacgagcatgaagacagtctg
attattctgacggatgggttgagcatcggccattatgctgtggctcaggatggatcgctc
gtcgaagtgaataaggtgaagatgagtgcggctggagcggaggggagcgctgcaatggtg
tgggcaggcgttggtttggtggcctgcgcagtgggatccacagtggttcgctgctgggag
ctctcatccggggactcctactcgctgcccgtccaaccgcacgatcaggccaccgccaac
caggccatcacagctctcgcctactttgcacaggacgggacgttgagcgcatgcacgaac
gtgggcaacattctgttgtggcggcgcagtggcgggggagtgggagatgagtgggaggag
cttgctggcagccgtgtgcgaggtcacatccaggcatgcagctggggcgcctccgccagt
ctggccgtctgcaccgctgcagccgccttcctgctcaggcaacacgagctgtcagccgcc
tacacccatcgggtctctactgttcaagtatcagcgtcagatctggtggtatcattggac
ggtgactcagctgagctgaagactgacctgaaggtgtgcggtgtgtccgtgtccaaggac
aatatagtcgtgtggagtggaaaaacagtggttgtgtaccaatcggctccacttacatct
ctcaatgtcattagttcgtttgcttgcgaatgtgagtgtgttgccctgctagaacagagc
ctggttgtgcttgagtcgaagagcagtcacgtgcaagtgatgacatttcagggcactgtc
aagcagtctctcacatgcagcagcacacctattggacttcacctatcttcttcgtcttct
catctggttgtctggactatgtctggtgctctccatgtttgggaccttacacgcagagag
gcaaaagcagtgtgtccgcccaaggacctgatggaatgcttggatgactttggtgaggtg
atttgtgccagagtcaatgcaaatggctctcgtgtgtcgttgagtgtggctggagtcaac
cttcttccattgccctcagtctacatatgggacttggaaagtgactcactatcttgtcac
tcattctctgctgatgaaagtttcagcaacgaaacaaaaaggtttattgtcaatcacttt
tgggatgaacaagagccccgattgcttgtatgtgaagccaaaagactcccgccagatgca
tctctgaaatcacatcataccaataatcaaaggagcccgccaagtgatgctgacaaacat
ttaactgttttaacgagtcttgcctactcgtctactcatggcattctagtgcaagatgtg
atgcctgctcctgagcactttgttagtctgttagcggttgatactcctcatcttattgta
ctagtcaaaccaacaaatcaacagcgagtgacatccagcaagatacttatgaaagacttc
gagggtctggaaaattgtgactcagctaccagagcggctgtacataacttcagcttttgc
ctcagcgttggagacatagaccaggcatttaagactattcggcatgtcaaaagtgttgca
gtgtggagcaatctggcgaaactgtgcgtgaagacgcgtcgcctggatgtggcgggggtg
tgcctcggcagaatgggtgacgcgcgaggcgtggctgccctgcgcgatgctcaagcctac
ccccaactcgaggctaggcttgccactctagctgtacacctcggactgattgatgaagcg
gagaagctgtttgcaagctgcggccgctgggatctgctgaacaagatgttgcagggcctg
gacgagtgggagcgcgcactgcggctggcggaggagaaggaccgcatccacctgcgacac
acgcggcacgcctacgcgcggcacttggaggagagcggcgacgcggaagcggcagctgac
atgtaccgccaggcggacacgcaccgctcgcacgtcacccgcatgctgctcgaccagccg
caccagctcgaggcctacgttctcaactcaaaagatccggcattattcaaatggtgggct
caatacatggagagcagtggtgatatggagctggcaatgaagtactacaaggatgctgga
gatgacctgtcaatggtgcgggtgatgtgcttcctggaggagttcgaccgggcagcggag
atcgccagtcgctcatcggacaaagcggcctgctaccacctagctaggcaatacgagaat
atgggccatgtccaggaggctgttcacttcttcactcgggccactgcttatgccaacgct
attcgtatgtgcaaggagcagcatttggatgaccagctgtggtctctggcgttgtcggct
ggaccgcgtgaacagacagaggcagcccgccatcttgaatcgacggcgcccgatcgcgct
gtcctcctctatcatcgagctggactcttccgcaccgctctagacctttacaaagacgga
gtatcactttgttgggaaaggagtgtgccactgactgaagagctcgcagaagccctcacc
ccctctcagggcgatccaaatagggctgaaattctcgagcacctggctgaatgtgctctc
atgcaggccaattaccatcttgccacaaagaagttcactcaggctggtaacaaggtaaag
gcaatgaaggcactcctgaaatctggagataccgaaaaggtgattttctttgcgacggtt
tctcgacaacgtgagatctacgtgatggccgccaactacttgcagtccctcgagtggcag
tcgcagcccgacctgctcaagaacatcgtcacgttctacaccaaaggccgtgctccccat
cttctcgccaacttctatacatcttgtgctcaggtagaaattgatgagtatggaaactac
gagaaggcgttgggtgcattgaatgaagctgcacgctgcctatcgaaggactctgaccag
tatgccagtgttgttgaatcagttgctagaaaaactgcttctgtgaaaaagttccttgat
atacgaagaatgctagacagaggagaggcggagagcgggttgcaacagtgcagacagctg
ttgtcggccggctgtgacctggtgaggagtggcgacgtgtattcgctcatgatcgaacag
gcaaccaaagcgaacgattggcgaacggccgcacgtctagcgcaagagctgcgtcaagct
cagcctcatgataatctctccttgtatattcccaaagatataatggaaagactgggattg
gatcataaacaagaattggaatctcacgaggttgatcctgaagaagcagttgaagaagca
gtttaa
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