Nilaparvata lugens (brown planthopper): 111053139
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Entry
111053139 CDS
T07276
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03420
Nucleotide excision repair
nlu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111053139
09124 Replication and repair
03420 Nucleotide excision repair
111053139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nlu04121
]
111053139
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111053139
Ubiquitin system [BR:
nlu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111053139
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
111053139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
WDR55
EIF3I
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
WD40_RFWD3
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
111053139
NCBI-ProteinID:
XP_039295212
LinkDB
All DBs
Position
12:complement(26813053..26823392)
Genome browser
AA seq
425 aa
AA seq
DB search
MDVRRKINKKLWKKKNIVLCLESLQMGTMTASKLKEIDSRRRILEMSVSRLMDLRQAQDG
SVTYLDLDGYSGRFLLSACNSGSIFIHDLANLTGDLRYESRVVGQCLPGDPGHSGARLET
AQWYPFDTGLFTTSGGNSQLRVWDGNQLRWIEVIDVKDTINRHHMSPVPSHTSCLVAVAT
LSEFVYLVDLRTGNSVRELRGHMEGVNACAFSPREAHLLVTGGVDGSVLLWDVRMSRGYL
REMPKDSSETSKKTPKKCLIKSVCFCSDGRSVVLVNQKGKILLWNLFNNDRSKSVREFTG
TSNGKTIRIQMDVSSDLDIVFIPENRSVAVYSLKTCNIVKRLNDHYGLVNCCRFNSFSQE
LYSGGMDHIIVPYRAEAEISRGFTVDLERKDYDVYTGGNEMKSSWKTGLKVKPSKDSLWN
DSDSD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgcggaggaaaattaacaaaaaattgtggaagaagaaaaatatagttttgtgt
ttggagagtttacaaatgggtacaatgactgcatcaaaacttaaggaaattgacagcaga
cgaagaattcttgaaatgagtgtgagcagattgatggatttgcggcaagcccaggatggc
tctgtgacatacttggatttggatggttacagcggtcgatttttgttatcggcctgcaac
agcggctcaatcttcattcatgatctggcgaatttgacgggtgatctgcgctacgaaagc
cgcgtcgtgggccagtgcttgcccggtgacccggggcatagtggtgcccgcctggagacg
gcgcagtggtatccgttcgacaccggtctgttcaccaccagtggtggtaactctcagttg
cgggtctgggatggcaaccagttgaggtggatcgaggtaatcgacgtgaaggacaccata
aaccgacaccacatgagccccgtgccgtcgcacaccagttgtctggttgctgtggcaact
ttatcggaattcgtctacctggtcgacttacgaaccggcaacagtgtacgggaattacgt
ggtcacatggaaggcgtgaacgcttgcgcgttttcgccgcgcgaagcgcacctgctggtc
actggcggtgtggacggttccgtgctgctctgggacgtccgtatgtcccgcggatatctg
cgtgaaatgcccaaggacagttccgagacgtctaaaaagacgccgaaaaaatgcctgatc
aaaagtgtgtgtttctgcagtgatggacgatctgtggtgcttgtcaaccaaaaaggaaaa
attctgttatggaacttgtttaataatgatagaagtaaaagtgtgagagagttcacaggc
acgtccaacggaaagaccatcagaattcagatggatgttagttctgatctggacattgta
tttatccctgagaaccgctcagttgctgtatactctttgaaaacctgcaacatcgtgaaa
cgtctgaacgatcattacggtctagtgaactgttgtcggttcaattcgttcagccaagag
ttgtacagtggcgggatggatcatatcatagtgccttatagagctgaggccgaaatatcg
cgcgggttcactgtggatttggagagaaaagactatgatgtctacacgggaggaaatgag
atgaagagtagttggaaaaccggtctcaaggtaaaaccgtcaaaggattccttgtggaat
gacagtgatagtgattaa
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