Nilaparvata lugens (brown planthopper): 111053207
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Entry
111053207 CDS
T07276
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111053207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111053207
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111053207
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111053207
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
111053207
NCBI-ProteinID:
XP_039295878
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All DBs
Position
1:65737546..65751600
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AA seq
217 aa
AA seq
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MKTKLQSYKSFKIAVDVGNKDNIIKPELWPEGLRICAADNKHVAGKGTYERQGYIYSTLA
GILHLVKQKEEGFVIEVHSSNEQSVVPVPGNIVTAKVMTINLRMAICQIRCIGDTVLSQP
YRGILRREDIRATEKDKVEVYNSVRPGDIILARVLPVNEVQSYQLSTAENELGVVIAHTS
AGVPMIPISWDQMQCPKTYVKENRKVAKIVPEDIVVD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaactccagtcctacaagtctttcaaaattgctgtagatgttggtaataag
gataacattatcaaaccagagttatggcctgaaggtttacgcatatgtgccgcagacaat
aagcatgtagctggaaaaggaacatatgaaagacaaggctatatttattctacgcttgct
ggaattcttcacctggttaaacaaaaagaagaaggatttgttattgaagttcacagtagc
aatgaacagagcgttgtacccgttcctggaaatatagtcactgctaaggttatgactatc
aatttaaggatggcaatttgccagatcagatgcataggagatacggttctaagtcaaccc
tacagaggaatacttagaagagaagacattcgggctacagagaaggacaaagtagaggtg
tacaattcagtgaggcctggtgacatcatcctagctagggttcttccagtgaatgaggtg
cagagctaccagctatcaactgccgagaatgaacttggagtagtcatagcacacacatca
gccggagttcccatgataccaatcagttgggatcaaatgcagtgtccaaaaacgtacgta
aaagaaaataggaaagtagcaaaaatcgttcccgaagacatagttgtagactag
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