Nilaparvata lugens (brown planthopper): 111053669
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Entry
111053669 CDS
T07276
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111053669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111053669
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111053669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
eIF2A
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF4
NBCH_WD40
PEP5_VPS11_N
Ge1_WD40
Beta-prop_WDR11_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
111053669
NCBI-ProteinID:
XP_022196275
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All DBs
Position
3:54005565..54033006
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AA seq
998 aa
AA seq
DB search
MITITPTPQLYNASTPSFPTQPPNNRFMPPQRFHGPRHQFFQPFKPFGRGGPSPLDPEFD
GKRLRKSAMRKTVDYNAAIIKMLEGRVWQRDHRDRRALQPDAIYIPDMLPPPSYEENAIN
AVTTRFVKTATNKMRCPVFCMAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHESPV
RTMVWSHNDIWMVTADHSGYVKYWQSNMNSVKVFLAHKEAIRGISFSPNDSKFATCSDDG
TVRIWDFHRCHEERILRGHGADVKCVHWHPQKGLVVSGSKDNQQPVKLWDPKTGQSLATL
HAHKSTVMDVKWNKNGNWLVTASRDHLLKLFDIRNLSSEVQTFRGHKKESSSIAWHPYHE
GLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWTLAWHPLGHILCSGSNDHTSKFWTR
NRPGDQMRDKYNLNTLPANLGGLDENDIDDYAAIPGMGPEDKVEPSSTQEEENTAVSSGV
IPGLDFDPLDEKNKIALKKVPYSKPIPKNFQAQWNATRNADDSGDESKKGIDPIAIINSI
VEKQPGVIPLTDVTPESLLIYGKVLKVEAGTPLAEAIAGGVEKLYKYVNSGVIPELREVM
PYYDYSDTEKEDVISLDEDDEIDPEHLDPYKNDSFFGNDLEAFDGDKKEWMTNENQNMQF
QGMPPNNMMPPDFGGNKGGNMPPNNFQMPPPMMNPPFSGMNRPPPQGMFQQGGPNNQGPP
NNQGPPNNQGFQMHHPNNMNMPPHMQNKNFRFMPPGQGMPMDQSRPPPPQLGGPGDQQQN
PMYQDSDSPRNSPMNRGRNDRGNFSGGRFQGQGRRFDDSFDRFNDSNRSNDFNRSNDFNR
SNRSNDFDRSSDFNQSGNFDEDTYDDYDDNEEGDGNYQDQHQNRRRWNDSDQNKWEEGGE
DDVGEEEGEQDGQGSGRGGGRGFRGGFRGRGGGGGGVRGGNRFGNWDNDDQPWRGKRGGR
GGGRGPGPGPGPRRGRFNSRMRGPKRMRGHDRNNDNRD
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgattaccataacacctactccacagctgtacaatgccagcactccaagttttcctact
caaccaccaaataatcggtttatgccaccccaaagatttcatggacctagacatcaattt
ttccaacctttcaaaccatttggaagaggaggtccatctcctttggacccggaattcgat
ggaaaacgtctccgaaaatctgctatgcgaaaaacagtcgattacaacgctgctattatt
aaaatgttggagggcagagtgtggcaacgagatcatagggacagacgtgctctacagcca
gacgccatctacattccggacatgcttccgccaccgtcctatgaggagaacgccatcaac
gcggtgacaacgcgcttcgtgaagactgctaccaacaagatgcgctgtcctgtcttctgt
atggcgtggacgcctgagggcaggcgtcttgtgactggagcctcttctggcgagttcacg
ctctggaatggactcaccttcaatttcgaaactatccttcaggcacacgaaagccccgtt
cggacgatggtgtggtcccacaatgacatctggatggtgacggccgatcactctggctac
gtaaagtactggcagtcaaacatgaacagcgttaaagtttttctagcgcacaaggaggca
attcgtggcatcagtttcagtccaaatgacagtaagtttgcaacatgttcagatgatgga
accgtcaggatatgggattttcacagatgtcatgaagaacgaattttacgaggtcatggt
gcagatgtgaagtgcgtgcactggcatccacagaaaggactggtagtgtcaggtagtaag
gataatcagcaacctgtcaaattatgggatccaaaaactggccaatctcttgctacatta
cacgctcataaaagcacagtgatggatgtgaaatggaataagaatggaaactggttagta
acagcctcaagagaccacttactgaagctgttcgacattcgtaatctttcttcggaagtg
caaactttccgcggtcacaagaaggaatcgagcagcattgcctggcatccctaccacgag
ggactgttctgcagtggcgggtccgatggagctatactattctggcacgtcggggctgac
aaagaggtgggagcaatcgaacaagcacatgacagcatcgtttggacattggcgtggcat
ccgttgggccatatcctgtgctctggatctaacgaccataccagcaagttctggactcga
aatcggcccggagaccagatgagagacaagtacaacctcaacaccctcccagcaaatctt
ggtggtctcgatgaaaacgatattgatgattatgcagctattcctggcatgggtcctgaa
gataaagttgaaccatctagcacacaagaagaagaaaacaccgcagtgtcttcaggcgtg
atacctggacttgattttgatccgcttgatgagaagaacaagatagctttaaaaaaggta
ccgtattccaagcctatccctaagaacttccaagcacagtggaatgccacaagaaatgcc
gatgattctggagatgagtcgaaaaaaggaattgatccaatcgcgatcatcaattctatc
gttgaaaagcagccaggtgtgattccgctcactgatgtcacacctgagtctcttttaatt
tatggcaaagttctcaaagtagaggctggaaccccattagctgaagcgattgcaggcgga
gttgaaaagctctacaagtatgtgaactcaggagtgatcccagaactgcgggaggtgatg
ccctactatgactacagcgacaccgagaaagaagacgtcatatcgttggacgaagacgat
gaaatcgatccagaacatctcgatccctacaagaacgactctttctttggaaatgatctc
gaggcatttgacggggataaaaaagagtggatgactaatgaaaaccagaacatgcagttc
caaggaatgccaccaaacaatatgatgccgccagactttggagggaacaagggtggaaat
atgccaccaaataacttccagatgccgcctcccatgatgaaccctccgttctcaggcatg
aaccgccccccgccgcagggcatgttccaacagggtgggccgaacaaccagggtccgccc
aacaaccagggtccgcccaacaaccaaggcttccaaatgcaccaccctaataacatgaat
atgcctccacacatgcagaacaaaaatttcaggttcatgccgccaggtcaagggatgccc
atggatcaatccagaccccctcctcctcaactgggaggcccaggagaccagcagcaaaat
cccatgtaccaggactctgattcgccgagaaactcgccaatgaacaggggaagaaatgac
aggggcaattttagtggcggcagattccaaggccaaggcaggagattcgacgacagtttt
gataggttcaacgattctaataggtcaaatgacttcaatagatctaatgacttcaataga
tcaaatcgatctaatgactttgataggtcaagtgattttaaccagtcgggtaacttcgac
gaagatacctacgacgactacgatgataatgaggagggggatggtaactaccaggaccag
catcaaaatcgtaggcgatggaacgattcagatcaaaacaagtgggaggaaggaggagaa
gatgatgttggtgaagaggaaggcgaacaggatggccaggggtcgggaaggggagggggg
agaggattcaggggagggttcagaggcaggggtggtgggggtggtggagtaagaggaggt
aaccgatttggcaactgggataatgatgatcagccatggaggggtaaacgtggaggtaga
ggaggaggtagaggtccaggtccgggtccgggtccgaggagaggacgattcaactccaga
atgcgaggtccgaaaagaatgcgtggtcatgatagaaataatgataacagggattga
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