Nilaparvata lugens (brown planthopper): 111053953
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Entry
111053953 CDS
T07276
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03030
DNA replication
nlu03410
Base excision repair
nlu03420
Nucleotide excision repair
nlu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111053953
03410 Base excision repair
111053953
03420 Nucleotide excision repair
111053953
03430 Mismatch repair
111053953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlu03032
]
111053953
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111053953
DNA replication proteins [BR:
nlu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111053953
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111053953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
AAA_22
RuvB_N
RNA_helicase
AAA_14
AAA_30
AAA_33
nSTAND3
AAA_5
AAA_16
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
111053953
NCBI-ProteinID:
XP_022196593
LinkDB
All DBs
Position
1:complement(56959787..57000880)
Genome browser
AA seq
1011 aa
AA seq
DB search
MDIRNFFRPSPTSKGVKNVESEKKKKAKKIIISDSESDDDSPKITTSKKNVKSSTGNETN
SVKDEQKSKYFKPAKPEDVFSCAPVKQTSVPKSTKKSSKNVTENDDDDGFDDIFLQLNDD
AVEKMIKEATGKSSSVSNGKMELDEKQKESKDWKEKGSDRNDKKDKNIDNEKHDGFSSRK
NHIEKHEVSEKSHKEKHESSPTEKSHKDKHEITSSKKSHKQKPDSSPSRNGHKEKHSSSS
SKNSHKIEKIVSNGLTKHKIKESNDKIADKMSNQVLNLSDSDSDDSVEIEKEKNKSKREE
KKSSEHIKKEAKLKHSPDKNGMISPEKKIKKSPQVKKIEPMKNTCIDMSESGSSDEEIQI
KSPQKRNAKPESTATSPKRRKIEETKVETGQKRKSDDIGSPHDSKKMKFGESSQSCSSQA
SLSSLSQASASQQSSASSRPPLSQLWVDKYRPASMKQLIGQQGDKSVAKKLTHWLSRWHA
NHSGNKKLQRPSPWAKDDDGAYFKAALLSGPPGIGKTTTAHLVCKELGFDMVEFNASDTR
SKKLLHQEVSELLSSKSLAPFFTGGGSSRGVMTRNHVLVMDEVDGMAGNEDRGGIQELIA
LVKSAHVPIICMCNDRNHPKMRSLVNYCFDLRVQRPRVEQIKGAMMSICYKEGLKIAPDK
LNDIIKSTDQDIRLILNHLSVLAANKDSQLPNSEKFVKLGPWDVLRKVFSEEDLKKMTFN
EKSDLFFHDYSIAPLFVQENYLNVVPHAKLNKKEKMDVFAKAAESLCNGDLVDRTIRSRN
AWSLLPVQAVFSSVVPGEVLKGHMGGQINFPAWLGKNSSKNKMDRLQQELLVHTRLRVSA
SKEAINMDYSTHLRDLIVRPLLEHGSEGVSQSLEALKNYDLVKDDLDSLTELCKWPSSKD
PFAKVESKVKAAFTRAYNKSAAPPPYAVAAVAKKGRAGGGGDGDLLLATEDGLEEPNEAE
AEDDDAEDKDSIEVDSMISVKKKTSKTQEKNEASSSKGRGAGGKRGRGRGK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggatataaggaacttcttcaggccgtcgcctacgtcaaaaggtgtgaaaaatgttgag
tcagaaaaaaagaaaaaagccaaaaagataatcattagtgattctgaatccgacgatgat
agtcctaaaataactacatcaaagaaaaatgtaaaatcttcaactggaaatgaaaccaat
tcagtgaaagatgaacagaaatccaaatatttcaaaccagccaaacctgaggatgttttt
agttgtgctccagtcaaacaaacttctgtaccaaagtcgactaagaaatcttctaaaaat
gtgacagagaatgatgacgatgatggatttgatgacatttttcttcaattgaatgatgac
gctgttgagaaaatgatcaaggaagctacaggaaaatccagctctgtttcaaacggaaaa
atggaattagatgaaaagcagaaggagagtaaggactggaaagagaagggaagtgataga
aatgataagaaagataaaaatattgataacgaaaaacatgatggtttttcatcgagaaag
aatcatatagagaagcatgaagtatcggagaaaagtcataaagaaaaacatgaaagttct
ccgacggaaaaaagtcataaagataagcatgaaataacttcatcgaagaaaagtcataaa
caaaagcctgatagttctccatcacgaaatggccataaagaaaaacatagtagctcttca
tcgaaaaatagtcataaaattgaaaaaattgtatccaatggtttgacaaaacacaagata
aaagaatcaaacgataagatagcagataaaatgtctaatcaagtcttaaatttatcagat
agtgatagcgacgattctgtagaaattgaaaaggaaaagaataaaagtaaaagagaagag
aagaaaagtagtgaacatattaaaaaagaggctaaattgaaacattcacctgataaaaat
ggaatgatttcgcctgaaaagaaaattaaaaaatctcctcaggttaaaaaaattgaaccg
atgaaaaacacttgcattgatatgtcggaaagtggaagtagcgatgaagagatacaaata
aaaagcccacagaagagaaacgccaagcctgagtcaacagctacaagcccaaaacgccgt
aaaatcgaagaaacaaaagtggagaccggacaaaaaagaaagtcggacgacatcggttca
cctcacgattcgaagaaaatgaaatttggcgagtcaagccaatcgtgttcctcacaggcg
tcactgtcgtctttatcgcaagcatctgcctcacaacagtctagtgcgtcgtcacgccct
ccactgagtcagctgtgggtggacaagtataggccggcctccatgaaacagctgattggt
cagcaaggtgataaaagtgtggctaagaagttgacgcattggttgtcccgctggcatgcc
aaccacagcggcaataagaagctgcaaaggcctagtccgtgggcgaaagatgacgacggt
gcctatttcaaagcagctctgttatcgggaccacctggaataggtaaaacaaccactgca
cacctggtatgtaaggaacttggcttcgatatggtggaattcaatgcatccgatacaaga
tctaaaaagctgctacatcaagaggtctcagaacttctttctagtaaatcattggctccg
tttttcacaggcggtggcagcagccggggggtaatgacgaggaaccacgtgctggtgatg
gacgaggtggacggaatggcgggcaacgaggatcgcggcggcatccaagagttgatagcg
ctggtgaagagtgcgcatgtgccgatcatatgcatgtgcaacgaccgcaatcatcccaag
atgcgatccctcgtcaactactgcttcgacctcagggtgcagcggccgcgtgtagagcaa
atcaagggagcaatgatgtcaatctgctacaaagaaggcctgaagattgcgccggacaag
ctgaatgacatcatcaagagcaccgatcaggacatcagactcattctcaatcacctctca
gtgttggcagccaacaaagacagtcaactacccaactcagaaaagtttgtcaaattgggt
ccttgggatgttttacgcaaggttttctcagaagaggatttgaaaaagatgacattcaac
gaaaaaagtgatttgttctttcacgactatagcattgcacctctgtttgttcaagaaaac
tatttgaatgtagtgccgcatgccaaattgaacaaaaaagaaaaaatggacgtgtttgcc
aaagctgccgaaagtctatgcaacggagatcttgtcgacagaactataagaagtcgtaac
gcttggtctctgttacctgtgcaggctgtgttttcatcagtagttcctggagaggtgttg
aaaggacatatgggcggccagatcaatttccccgcctggcttggcaaaaattcgtcgaaa
aataaaatggacagattacaacaagagctgcttgttcacaccaggctaagggtttcggcc
agcaaagaagcaatcaacatggactacagcacgcatctgagagatctgatagtgaggccc
ctgctggagcatgggagtgagggtgtgagtcagtctctggaagccctcaaaaactatgat
ctggtcaaagatgatctggatagtctgactgaactgtgtaaatggcccagctccaaagat
ccttttgctaaagttgagagcaaggtgaaagccgccttcacccgcgcctacaacaagtcg
gcggcgccgcccccctacgcagtggcggccgttgctaagaaggggcgggcggggggcggt
ggtgatggtgatctgctgctagccaccgaagatggcctagaagagccgaacgaagccgaa
gccgaagacgatgatgccgaagacaaggactcgatcgaggtggactctatgatttcggtt
aaaaagaaaacgagcaaaactcaagagaaaaacgaagcatccagctcgaaaggaaggggt
gcggggggtaagagggggcgaggtcgaggcaagtga
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