Nilaparvata lugens (brown planthopper): 111054502
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Entry
111054502 CDS
T07276
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111054502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111054502
03012 Translation factors [BR:
nlu03012
]
111054502
Enzymes [BR:
nlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111054502
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111054502
Translation factors [BR:
nlu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111054502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
HA2_C
HA2_N
Cas3-like_C_2
DEAD
Motif
Other DBs
NCBI-GeneID:
111054502
NCBI-ProteinID:
XP_039300236
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All DBs
Position
1:78774354..78798225
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AA seq
678 aa
AA seq
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MHNDPELQGISHLLMDEIHERDVTSDFFMAVMKELTTRRNIKVVLMSATMNSHMFSAYFN
NCPMLEIPGSMFPVKVHFLEDILSVIKPNSSVVQSQRSTGMGRRGATLGRSNNNFHAKKT
DYAIMMKQYLERLNRTKEYPNNVVQQLTDFKVEFLNVENVFNLINHICFEKRQPGAILVF
LPGWDSISNLYNMLDECGRFPEDEFLIIALHSSTSIQHQQLAFQTPKPGVRKIVIATNIA
ETSITIDDIVFVIDCGLCKVNRFDATKKITTLDTEFISKASLLQRRGRAGRLQEGECYHF
ITKVRDQRLQLEPDPEIRRSRIEDIIIKCKLLPLGKTQDFLQKLLNPPPVANIRVAIETL
IEAQVLDIDENLTPLGNLIAFLPVDHFLAKMIILGVFFRCLDPILSIAASLSLKDPFVLQ
PKLKKELELKKLELDQKRYSDHLLIGTVMRLWEEAVGDNRSEEFCKENFVSEATLEFLGA
IKQQLADCLHEMKFIPSGNFLNYTDQNLNVNSYNVAVLRAVVCAALYPNVANVKSELIMM
NNQQVPALETYEDKQVYLGFKSVNAKTHHFPSKYLVYFTKQSCGNKVWLHDSTMVSLQSL
VLFANRVDVSFSPLVVIKNIPYDMSRNKDILTLRNRFHAAFKDFTANPRLIPVDSDEETN
VVVSQIVKLLSSEEEKMQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgatcctgaactgcaagggatatcccatctcctgatggatgaaatacacgag
cgagatgtcacaagtgacttctttatggcagttatgaaggaactcacaaccaggagaaac
ataaaggttgtactcatgagtgccacgatgaactcccatatgttctcagcatatttcaat
aactgtcctatgttggaaattcctggatctatgtttccagtaaaagtacattttctggag
gacattttatccgtgataaagcctaacagctcagtggttcagagccagaggtcgacgggg
atggggagaagaggagctacattgggtcgatctaataataatttccatgcaaaaaagacc
gattatgctattatgatgaagcaatatctagagcgactgaatagaaccaaagagtatccg
aataatgttgtgcagcaattgacggatttcaaagttgaatttctgaacgttgaaaacgtt
tttaatctgatcaatcacatctgcttcgaaaagaggcagccgggtgctattctggtcttc
cttccaggatgggacagcatttcgaatctttacaacatgttggatgagtgtggacgattc
ccagaagatgagttcttgataattgcacttcatagctcaacttccatacaacaccaacaa
ttggcgttccaaactcctaaaccaggagtaagaaagatagtgattgctacaaacattgct
gaaacgtcaatcactatcgatgatatagtgtttgttattgactgtggtttgtgcaaagtg
aaccgattcgacgccactaaaaaaataacaactctggacacagagttcatctcgaaagcg
agtctccttcagcgaaggggtcgtgccggaaggttgcaagaaggagaatgttaccatttc
atcaccaaagtaagagatcaaagacttcaacttgaaccagatccagaaatccgcaggtca
agaatcgaagatattataataaaatgcaaactactgcctcttggaaaaacccaagatttc
ctacagaagctactcaatcctccaccggtggccaacatcagagtggcaattgaaactctg
attgaagctcaagttctggatattgacgagaatttgactcctttgggcaacctgatcgct
ttcttaccagttgaccatttcctggcaaaaatgatcatccttggagtgttcttccgttgc
cttgatcctatactcagtattgctgcatcgctcagcttgaaggatccctttgttcttcaa
cctaaactcaaaaaggaacttgaactgaaaaaactggaacttgaccagaaacgttattca
gaccacttgctgataggcactgtgatgagattgtgggaggaagctgtaggcgataaccgc
agtgaagaattttgcaaagaaaactttgtatctgaggcaacacttgagtttctgggtgcc
atcaaacagcaattagctgactgcttgcatgagatgaagttcattcccagtggaaacttc
ttgaattacacggaccagaacttgaatgtcaactcgtacaatgtggccgtgctgcgagct
gtggtttgtgctgcactctaccccaacgtagccaacgtgaagagcgaattgattatgatg
aacaatcaacaagtacccgccttggagacatatgaagataagcaagtgtaccttggcttc
aagtcagtgaatgccaagactcatcatttcccaagtaaatacttggtgtactttacgaag
caaagctgtggcaacaaagtgtggctgcacgacagcaccatggtcagcctgcagtcactg
gtgctcttcgccaaccgagtcgatgtttccttctcaccacttgttgtcatcaaaaatatc
ccctacgacatgtcacgaaataaggacattttgactttgagaaaccgattccatgcagcg
ttcaaagatttcactgccaacccaagactgatcccggttgactctgatgaggaaacaaat
gttgtcgtgtcacaaattgtgaaactgctgtcaagtgaagaagaaaaaatgcagtga
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