Nilaparvata lugens (brown planthopper): 111055283
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Entry
111055283 CDS
T07276
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111055283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111055283
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111055283
mRNA degradation factors
5'-3' decay
Decapping complex
111055283
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
111055283
NCBI-ProteinID:
XP_039298199
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Position
X:complement(4038799..4099809)
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AA seq
663 aa
AA seq
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MAEQRPFFNYSKNDEMPVLEDDPEFDMLNDETFGHGLSDDDDWEAQHEHLAHEYNKENGK
GPRGSIHPNSEAKEEEVDTNGISEQMIQFVLSDNEGQREANPREDGFRIIDPVHNLENKS
AAENGRWFSWIPPQPPLAPMQQLPPALPKIPTLEEIERDLIKSCTNKNENVTTPGSQPSQ
PSNTVLPLNMDNQFNFSRLPPPPHNVPPPAFIQTPLNMMNIVQQMPPPPVHLQGPPPPFP
YPPGAFMPHTPQTQSKRFPSDFPRMDGRGGIRHQGHDFQNRRGNVRGGRGGHHGQYYEPF
NMRGGGQRMYRPSNSNLQQHSQNVVEDEYANLMTVQEKNWLAQIQQYQLNSMNPTKEDYY
YTTFMSRKQGSSIRKNNNFGGSQRSVREIPPKTAYTPLQFENSLGKLQVGSVIAPRKIID
IDVVENVDPFSQAAAPTPKQIFMEIELMFNYVLEMEECDAADQPCYLLPHGSDKLVEHIS
ERSRFYPYMNIHKGRQVVLRLLPYVNNTCPIMKKMVGSMVPISRKVNGDGQLLLSYLPFI
RAWLAEMDMQQLVCFAVQAQPAIHHILTNKFTISVLANMVERAELLLQETPDAEDVKWNS
FIRNVVKQTLELDGALERPVVGIDPHVLKCHLIRCTGDRFTPEQLTVALKTLSNASPSKP
TDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacagagaccttttttcaattactcgaagaatgatgaaatgccagttctggaa
gatgatcctgaattcgacatgctcaatgacgaaacatttggtcatggcctctccgacgat
gatgattgggaagctcaacatgaacatctagcacatgaatacaacaaagaaaatggaaag
ggtccaaggggatccatccaccctaatagcgaagcgaaggaagaagaagtggatactaat
ggaataagtgaacaaatgatccaatttgttctctcagataatgaaggacaaagagaagca
aacccgcgtgaagatggcttcagaatcattgatcctgttcacaacttggaaaataaatca
gctgctgagaatggaagatggttttcttggattcctccacagccgccgctggccccaatg
cagcaacttccccccgctttgcctaaaataccgactcttgaggaaatagagcgagatctt
atcaaatcctgcacaaataagaatgagaacgttaccacaccgggttctcaaccttcacag
ccttccaatacagtattgccattaaatatggataatcagttcaatttcagtagattgcct
ccaccgcctcacaatgtcccgccacctgccttcattcaaacacctctaaacatgatgaat
atagtgcaacagatgccaccaccaccagtgcacctccagggtccccctccaccgttccct
tatccacctggtgccttcatgccgcatacgccacagacacaatctaagagattcccaagc
gattttccgagaatggatggaagaggcggaattcgccatcaaggtcacgatttccaaaat
cggcgcggaaacgtgaggggtggaaggggtggacatcatggacaatattacgagccattc
aacatgagagggggaggacagcgtatgtacaggccctccaactctaatttacagcagcat
tcccagaacgtagtagaagacgaatatgccaacctgatgactgttcaggaaaaaaactgg
ttggctcaaattcagcaatatcagctgaactctatgaaccctaccaaagaagactactat
tacacgacttttatgagccgcaaacaagggtcaagtatccgcaaaaataacaattttggt
ggtagtcagagatcggtgagagaaatacctcctaaaacagcctatactccattgcagttt
gaaaattcactaggaaaactgcaagtcggaagtgtgatcgcacctcgcaagataatcgac
attgatgttgttgaaaacgttgaccccttcagtcaagcagccgctcccacacctaaacaa
attttcatggaaatagaattaatgttcaactatgtgctagaaatggaggagtgtgacgcg
gctgatcagccttgttatctgcttcctcatgggtctgacaagctggtagaacacatttcc
gaacgttcaaggttctatccttacatgaacatccataaaggacggcaagtggtgcttcga
ttgctgccatatgttaacaatacctgtccaatcatgaagaagatggtgggttctatggta
cctatctccaggaaggtgaatggtgatggtcagctcctcctcagctacctgcctttcatc
cgagcgtggttggcagaaatggacatgcaacagttggtctgcttcgcggttcaagcccaa
cctgctatccatcatatactcaccaacaagttcacaatctcagtactcgccaatatggtg
gagcgtgccgaactcctgttgcaagaaacccctgatgctgaagatgtgaaatggaacagt
tttatcagaaatgtagtgaaacagaccctagagctggacggtgcgcttgaaaggcctgtt
gtcggcatcgatccacatgtactcaagtgccatcttatcaggtgtaccggcgaccgattc
acccccgaacagctgactgtggcgttgaagacactcagcaatgctagcccctccaagccc
accgattcctag
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