Nilaparvata lugens (brown planthopper): 111055400
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Entry
111055400 CDS
T07276
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
nlu
Nilaparvata lugens (brown planthopper)
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111055400
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111055400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
111055400
NCBI-ProteinID:
XP_039288818
LinkDB
All DBs
Position
1:3558257..3625375
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AA seq
1778 aa
AA seq
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MFLSLVLDVMIPYEAQFSSDAGEEVPKNFSLTIANAKSLSQEQKAIILTGLYFKTWDALL
LDKLDASTCWKYLVGTNRLDLLKLWIKKDGNESTSCPNWPGEQFDQWPITQQMVDWIPEA
DNCLESTRQILLDWLAWWVQFIIEGATDKSWLQLWKTFTKVNESDWQQEFVLELVVKTAS
FISNGNMDAYLLSHPFVALAIAILQNKSLVDIEDALSISPLLAVGVQSRDEVDCKKQTSL
YALLSGTTAFQTDNLFQWQRKRLTQPESDSPFPHFGCSELSAKFGHKQTVQYVDYLHNAR
PSFAFLQFFQENSRAHGKIPVRMQKRGANVAHGLALRCALERDRDVPSACVAFIEMLTRS
SLPLRVHLAAINAIRHSDDVSHTQLTTTIEGLVSNNPSHAASLLQMLETAIHTQLTDLMT
SSEDITTSAGDATTSAGDVTTIASDVTACLKLWHLPVRLSRQHNLPLPLSLPKMAANQNR
WLLFVLCACIFEYPRPQTMQVLAKFASAPLREHLQYALRFEVGDEGHVVKGKLRNEREKG
KNEGENLRNVKIEGEEFESEDRMLKSDSEGNVRGKLRNERGKLGNEREKFDIEGRLLKSE
TLENKEDTLDGEANIMVRNEKESFASEVNKVRNDRETFEATRNGREKMKKEGDKIDMMKS
EREKYEALRNEKGKMKERGENFDVLESERGMFEAEDTNTSLFVQVARHGTNLTNLLTQTR
KLESPGLALLSSILEPSNVVASFCEWLVASLPPNLSFPYPTSPLDWTPTDVANLLNHAVS
LSFINTLQHGFEIFLKDHPLALVAEFLVDSVVHREFEKCVQDLERFKERVKGLGGGESKH
VLRGGESGNVLEDVGNEHVLGGGNVLEDIDWVVTTAVRLCTTALIRCFPSFSQQHTFLKT
ICKAELQDNLPLPHTSQTDFRLLLALTEYMLQEGLTLDYTVIYDERSGRLDFEKQLKQLI
EARRFAVAHSFATIGALSHARILLVEWRERAKTKMTDEFWSGCDAAFLAGNLAPEEAVRF
YLELNEGARSQEERYKLLKYALKWVKKLYLSSTETNTQELEILLKLYHLYLEDNFNFKLI
LDDVSFKPLKSAKSGLIDDVTVQWLRMRRPVKQLSDVRMRRLDALIGKLLDVGDLATVCY
LETLYAHKNKDSLLIDGCLGLAEGDFTTDSLPQAYAELLTNISTSHSVHGLRTSNYRHIK
STSLSLSCYSFQDLEEMTEVEDLNETIDTVCKLSEQVTHGSRITQYITAALRVAEAYHLT
YKVESTSLSLSCYSFQDLEEMTEVEDLNETIDTVCKLSEQVTHGSRITQYITAALRVAEA
YHLTYKEVISLEQPLSLLSGGQGCQQLQLARDLLTLAALDDAAVCVLVCQQLVASVAADC
CDQLFGCNQLTDVLQLCSVQQLPQLGRLLLKAAALRRPPGDGGGKVADCSRQTVELLILA
HSCFTKACNMEGISLVLNMCRKVVDALETAGKWQLMVRLMTGVGRYTEMRYVFHILKEND
QFECILSNTLGKFDGLKSATLDFARGCSSDDNSQGLFTLVALHFGMYADLAAMFHESAAA
ALHSLKYASPPPDRSRLVRSEHNERCLQSAIDDYSHAAQHFIQAERIGRATRTVARAELV
ALQLSHLRAVPMGSSQHNLLEGCGTGDGEGGRLAGSYEEACVLVRGGGGVEWCDVIYANV
IERGSQSFMHAFMQHHSLTPKLVYQVATRFQLDKMATAAMEKNMKQFVQLIALSDLKYRV
CSQLGFKDVLSSQLTGSDHLPYLKDTVWRQGFKAAHHH
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgtttttatctctagtcctggatgttatgataccgtatgaggcacaattttcatctgat
gcaggggaggaagttccgaaaaatttcagcttgacaatcgcgaatgcgaaatcattgagc
caggagcagaaggcaattattctcactggactttacttcaagacatgggatgctctacta
ttggacaagttggacgctagtacttgttggaagtatctggttgggaccaaccgtttggat
ctgttgaaactgtggattaaaaaggacgggaatgagtcgaccagttgtcccaattggcct
ggtgagcaattcgaccagtggcccataactcaacaaatggtcgactggattcccgaggct
gataactgtttggagagcacacggcagattctactggattggcttgcctggtgggtacaa
tttattattgaaggagcaactgacaaatcatggctgcagctgtggaaaacgtttacgaaa
gttaatgaaagtgactggcagcaggagtttgttctagagctggttgtaaaaaccgcctct
ttcatctctaatggaaacatggacgcctatctgctcagtcatccctttgtagcgctggca
atcgccattcttcagaataagtcgctggttgacattgaagatgcactttcaatatcgccg
ctgttggcggtgggagtacagtcacgtgacgaggtcgattgcaagaagcagacctcgctg
tacgctctgttgtcggggaccactgcattccaaaccgacaacctgtttcagtggcagcgg
aaaagattgacacaaccggagagcgattcgccgttcccccattttggctgcagtgagttg
agcgccaaattcggtcacaagcagacggtgcagtatgtcgattatctgcacaatgctcga
cccagtttcgcgtttctgcaattcttccaggagaacagtcgagctcacggcaaaattcct
gtccgaatgcaaaagagaggcgcaaacgtggctcatggcctggcgcttcgctgtgcgttg
gagagagacagagatgtgccgagcgcctgtgtggcgttcatagaaatgctaacaaggagc
agtttgccgttgcgcgtccatctggccgccatcaacgccatccgccactctgatgacgtc
agtcacacgcagttgacgacgacaatcgaaggcctagtctccaacaacccaagtcacgcg
gcctctcttctacaaatgctggaaaccgccatccacacccagctgacagatctgatgacg
tcatcagaagacatcacaacctcggctggtgacgccacaacctctgctggtgacgtcaca
accatagctagtgacgtgacagcctgcctcaagctttggcatttgcctgtgaggctgtca
cgccaacacaatctgcctctgccgttgtcactccccaaaatggctgccaaccaaaatcgg
tggctgctcttcgtactctgtgcgtgcattttcgagtatcccagaccacagacgatgcaa
gtgttggcaaagttcgcttctgcgccactcagggagcatttgcagtatgctttgcggttt
gaggtcggtgatgaggggcatgtggtgaagggaaagttgagaaatgagagggaaaaaggg
aagaatgagggggaaaatttgagaaatgtgaagatcgagggagaagagtttgaatctgag
gaccgcatgttgaaaagtgacagtgaggggaatgtgaggggaaaattgagaaatgagcgg
ggaaaattgggaaatgagagagaaaagtttgatattgaaggtcgcctgttgaaaagtgag
acactggaaaacaaggaggatacgttagatggtgaggctaatataatggttagaaatgag
aaggaaagttttgcttcagaggttaataaggttaggaatgatagggagacgtttgaagct
acaagaaatggaagagaaaaaatgaaaaaagagggggataagattgatatgatgaaaagt
gagagggagaagtatgaagccttaagaaatgagaagggaaagatgaaagaaaggggtgaa
aattttgatgttttggaaagtgagaggggaatgtttgaagctgaagataccaacacttcc
ctattcgtacaggttgcaagacacggcaccaacctcaccaatctcctgacccaaacccgg
aaactcgaaagccccggtctagccttgttatcatccatcctagaaccctccaacgtggtg
gcttccttctgtgaatggctggtggccagtctccccccaaacctgtctttcccctaccct
acctctcccctagactggacccccacagacgttgccaacctgctgaatcatgcggtttcc
ctgtctttcatcaacacactgcagcacgggtttgaaatcttcctcaaggatcatcctcta
gctcttgtggccgagtttctggtggatagtgtggttcacagagagttcgagaagtgtgtt
caggatttggaaaggtttaaagagcgggtgaaggggttggggggtggtgaaagtaaacat
gttttaaggggtggtgaaagtggaaatgttttggaggatgttggaaatgagcatgtttta
gggggtggaaatgttttggaggatattgactgggtagtcaccaccgctgttaggttatgt
acgactgcgttgatccgctgtttcccgtccttctctcaacaacacacatttctgaagacc
atctgcaaggctgagctacaagacaaccttcccctgcctcacacttcccagacagacttc
cgtctgctcctagctctcaccgagtacatgctgcaggaaggcttgaccttggactacaca
gtgatctatgacgagcgcagcggtcgactcgattttgaaaaacagctgaaacagctgatc
gaagcaagacggttcgcagtggcgcacagcttcgcgaccatcggcgctctctctcacgcg
cgcatcctgctagtggagtggagagagagggcgaaaactaagatgacggacgagttttgg
agcgggtgcgacgcggcgtttttggcgggaaacttggcgcccgaggaggcggtgcggttc
tatttggagctgaatgagggcgcgaggtcgcaggaggaacgttacaaattattgaagtat
gctttgaaatgggtaaagaagctttatttgagcagtacagagaccaacacacaagaactg
gaaatacttctcaagctgtaccatctctacttggaggacaatttcaattttaagttgatt
ctcgacgacgtgtcattcaagccgctgaaatcggcgaaaagtggtctgatagatgacgtc
acagtgcaatggctgcgaatgcgtagaccagtgaagcagttgagtgatgtgcgcatgcgc
agactggatgcacttattggcaaactgttggatgtcggtgacctggcaacagtctgctat
ctggagacgctgtatgctcacaaaaacaaggactcgctcctgatcgacggatgcctagga
ttggccgaaggagatttcacgaccgattctctgccacaagcgtacgccgaacttctcacg
aacatttccacatctcatagcgtgcatgggctgcgcacctccaactaccggcatataaaa
tcgacgagtctctccctgagctgttacagtttccaggacttggaagagatgactgaagtg
gaggacttgaacgagacaattgacacggtgtgcaagctgagtgagcaggtgacgcatggc
tcaaggatcacccagtatatcacggctgctctcagggtggcagaggcttatcatctcacc
tataaggtcgaatcgacgagtctctccctgagctgttacagtttccaggacttggaagag
atgactgaagtggaggacttgaacgagacaattgacacggtgtgcaagctgagtgagcag
gtgacgcatggctcaaggatcacccagtatatcacggctgctctcagggtggcagaggct
tatcatctcacctataaggaagtgatctcactggaacagccactctcgctgctctcgggc
ggccagggctgccaacagctgcagctggcacgcgacctgctcacgttggcagcactggac
gacgccgctgtgtgtgtgctggtgtgccagcagctggtcgcctcggttgcagccgactgc
tgtgatcagctgtttggctgcaatcagctgaccgatgtactgcagctgtgcagtgtgcaa
cagctgccgcagctggggaggctgttgttgaaggcggctgctctgaggaggccaccgggt
gatggcggcgggaaggtggcagactgtagccgtcagacggtagaattgctgatattggca
catagctgtttcacaaaagcctgtaacatggaggggatttcgctagttctcaacatgtgt
cggaaggtggtcgatgctctagagacggccggaaaatggcaactgatggtgagactaatg
acaggagttgggcgatacacagagatgcgttatgtctttcacatactcaaggagaacgac
cagtttgaatgcattctctccaatacactgggcaagtttgacgggctgaaatcggctaca
ctggactttgctcgaggctgtagcagtgacgacaatagccaaggcctgttcacactggtc
gcgttgcacttcggcatgtacgccgacctggccgccatgtttcacgagtcggccgcagcc
gcgctccactcgctcaagtacgcctcgccaccacccgacaggtcgcgcttagtgcgtagt
gagcacaatgaaagatgtctgcaatcggccattgacgattactcgcacgccgcacagcat
tttatacaagcagagcgcattggtcgcgcaacgcgcactgtggccagggcggagctggtc
gccctgcagctctcccacctgcgagcggtgccgatgggctccagccagcacaacctgttg
gaggggtgtgggactggtgacggggagggaggcagactggccggtagctatgaggaggcg
tgtgtgctggtgagaggaggaggaggggtcgagtggtgtgacgtcatctatgccaatgtg
atagagcgaggcagtcagtcgttcatgcatgctttcatgcagcatcactctctcacacct
aaactggtgtatcaggtggccaccagattccagctggacaagatggcgaccgcagctatg
gagaagaacatgaaacagtttgtgcagctgatcgcgctgtctgacctcaagtacagagtg
tgcagtcagctgggtttcaaggacgttcttagcagtcagctgactggctccgatcatctg
ccctatctcaaggacaccgtctggcgacagggcttcaaggccgctcatcatcactag
DBGET
integrated database retrieval system
