Nilaparvata lugens (brown planthopper): 111055669
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Entry
111055669 CDS
T07276
Name
(RefSeq) collagen alpha-1(III) chain isoform X1
Organism
nlu
Nilaparvata lugens (brown planthopper)
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Gene cluster
GFIT
Motif
Pfam:
Trypsin
CLIP_SPH_Scar
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
111055669
NCBI-ProteinID:
XP_039291076
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Position
1:46517185..46534150
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AA seq
1419 aa
AA seq
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MKVLSVVVICCGIYSVNCYGPPPKSKKGKTTTTTTEASPSDDGIIFPDQDNNVNPVSYIQ
NNGVGSYGGGNPNYQSTNGGCGGGPTGSCGRPQGQPSYSPQGQQPSYNPQYPQGQSSYNP
QTPQGQQGQQPQQPSYNPQNPQLPSYNPQGQKPQSPYNPQGQQPQQPTYNPQYPQAKPPQ
QPSYNPQYPQGQSPQPSPQKPGGNYWWQGDSSPFNPQQQPASLPPQSSGNNVPPSNVGPT
APPNSGPNHPGTSQPGPTHPGPNHPGAPQPGPTYPGSNHPGALQPGSTHPGPSHQPAAGS
PPKPIDIQNNPFLSSALGGNKPSSCGGSYGGGACNPQPPSQGVQPPSLPPSNQPIACRPG
ASSGCSSGSPPYSPPPPQGSPSNPIAGQPANSPPKPVDIGNNPFLSSALNKPAGCSGSYS
GSCGSNPTNPQGQIQYPQQPQYLGPQQPVNIGQGSPQTPGSQSKPLHPGLSQIPGPQQSV
QSPDPGSQPPQGNPQYPDNQKPGQPQGGQQYPGTSQYPNPQQPGSPQYPGGNQYPNNQQP
SQSSPQYQKPSYLGQPQGSQNYPGNNPSQQGPAPQSELPLKYPGAHSGSPNSQTPGSGYN
PQQSGQQTTVNIPGRPQQYPNPGSQGKPSYPQYGSGASPGQQYTPQFPSSTVPCNQYNQL
CVAKSACQQGVLTQTGVPGRAGYCNAATEVCCKIPTGATPDKQSPPTIGYGNIPGTNGIP
LGGSIYDMTPKPSLNSVTPAPTQQPYTGALNTTPYPGCPAALKCVAITYCTVEGVMADKP
VYLTREQQENRVPLTDCMNLETNTQGKCCRDPNYKDPWPAGMMMGKTPAGGQFDDGQYHP
PATDDGQYKPPAEPETSGTFSHEAGLYYNNPSSTPKGHTIKKPIGNFNQNPTAFPTKPAF
VNGAPARQPAPVHENEYPEGVSPPSNDILPPNQVPLNSDTKLQPAGQNYQTGGQTYQPGG
QNYQPGQVNQSDKPNQPNPGSYSPGSTYQPDQVNPADKPNLPNPGSYSPGSTYQPDQVNP
ADKPNLPNPGSYSPGSTYQPGQVNPADKPNQPNPGSYSPGSTYQPNPKGTASNPDQPSFQ
QQPPNGQPLFQPNTQNGEKPVSAYQPGQPDTNSYQPVPAPIGLPRPASTCGKRLKETHNA
SPGDAGFAEFPWQALVSSASNKSYVCSAAIIADNAVITAAHCVEGLRSKDIAIEAGVYKL
LSLYENPIRRRPAAAVARHPHFSIENLSNDLAIIVVTQTFNFDDHISKICLPSTSKPKYD
QSSNCVVTGWGRKQLKGSIPESVLHKVDVKFIPEDVCESKLRSTNLGKYFILNKGFSCAL
PKNPSDLCKVDVGSPIACERGDGHYELAGVNSWDVGCQTDQTPTITSNPDAEWIDKVINT
PAEQLAIQEEKYFADKLKGESIDDVDIDQKPGFALGYGK
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctttcagtagtggtgatatgctgtggcatttattcagtgaattgttatgga
ccccctcctaaatcaaagaaaggaaaaaccactacaaccacaactgaggcttctccatca
gatgatggaatcatttttccagatcaagataataatgtgaacccagtgagctacatacaa
aacaatggtgtagggtcctatggtggtggcaatcccaattatcagtcgacaaatggtgga
tgtggaggaggccctactggtagttgtggtagaccacaaggtcagccatcatatagtcct
caaggacaacagccctcatataaccctcaataccctcaagggcagtcatcatacaatcca
caaactcctcaaggacaacaaggtcaacaaccacaacaaccgtcatataacccacagaac
cctcaattgccttcatacaaccctcaagggcaaaagccacaatctccatacaatccccaa
ggacaacaaccacaacagccaacatacaaccctcaatacccacaagcaaaaccaccacag
cagccatcatacaacccacaataccctcaaggacaatcgcctcaaccatccccacaaaaa
cctggaggaaactactggtggcaaggagattcttctcctttcaatcctcaacaacagcct
gcttcacttccaccacaatcttcaggaaataatgttcccccttcaaatgttggacccact
gctccccccaattcaggtccaaatcatcctggtacttctcagcctgggccaactcatcct
ggaccaaatcatcctggggcacctcagcctgggccaacttatcctggatcaaatcatcct
ggggcacttcagccagggtcaactcatcctggaccatctcatcaacctgcagcaggttca
ccaccaaaaccaattgatatacagaacaacccattcctaagctcagctcttggtgggaat
aagcccagctcttgtgggggcagttatggtggtggagcctgcaaccctcaacctccaagc
caaggagttcaaccccccagcttgcctccaagcaaccaaccaattgcctgtagacctggc
gccagcagtggctgcagctctggatcacctccttattcaccaccacctcctcaaggatca
ccatcaaacccaatagcaggtcaaccagctaactctccccctaagcctgttgatattggt
aacaatccattcctaagctctgctttgaacaaaccagctggatgttctggaagttactca
ggaagctgtggaagcaatccaaccaatccacaagggcaaatccaatatccccaacaacca
caatatttaggaccccaacaaccagtgaatattggtcaaggaagtcctcaaactcctgga
tcacaatcgaagccactgcatcctggactcagccagattcctggacctcaacaatcagta
cagtcaccagacccaggctctcaaccacctcaaggaaatcctcaatatccagataaccag
aaacctggacaaccacaaggaggtcagcaatacccaggaacaagccaatacccaaatcct
caacagcctggaagtccacaatatccaggaggcaatcaatatccaaacaatcaacaacca
agtcagagcagcccacaatatcagaagccaagttatctgggacaaccacagggatctcag
aactatccaggcaacaatccaagccagcagggcccagctcctcaatcagaattgcccctc
aaatacccaggggctcattcaggcagccccaattctcaaactccaggcagtggatataat
cctcaacaatcaggtcaacagacaaccgtgaacattccaggaagaccgcagcaatatccc
aaccctggctcacaagggaaaccctcctaccctcagtacggcagtggagcatcccctggc
cagcaatacactccacagtttccttcctcgactgtcccttgcaatcaatacaatcagctg
tgtgttgcaaaatcggcttgccaacaaggcgttctaactcagaccggcgtacctggtagg
gctgggtactgtaatgctgctactgaggtttgttgtaaaatcccaactggagccacaccg
gacaaacagtctcctcccactattggctatggaaacatcccaggaaccaatggaatacca
cttggaggatcgatttatgacatgactccaaagccttcattgaacagtgtaacacctgct
ccaactcaacagccctacactggagcattgaacacaaccccctacccgggatgcccggct
gctctgaagtgtgtggccatcacctactgcacagtggagggagtgatggctgacaaaccc
gtctacctcacccgcgagcagcaggagaacagagtgccgttgactgactgcatgaatttg
gaaacgaacacacaaggcaagtgctgcagagacccgaactacaaagacccgtggcccgcc
ggcatgatgatgggaaagacgccggctggcggacaattcgatgacggccagtatcaccca
ccggccactgatgacggccaatataagccgcccgccgagcccgagacatccggcactttc
agtcacgaagctggactctactacaataatccatcatcaacccctaaaggacacaccata
aagaagccaatcggtaatttcaaccaaaacccaactgcattcccaacaaaaccggcgttt
gtgaatggtgcaccagcgaggcagcctgctccagtgcatgagaacgagtatcccgaagga
gtgagccctccatccaatgacatcctgccgcccaatcaagtcccactcaattctgataca
aaactgcagccagccggtcaaaactatcaaacaggaggtcaaacttaccaaccagggggt
caaaactatcagccaggtcaagtgaatcaatctgacaagcctaatcagccaaacccaggt
tcatatagcccaggatcaacataccaaccagatcaagtgaatccagctgacaaacccaat
ctgccaaacccaggttcatatagcccaggatcaacataccaaccagatcaagtgaatcca
gctgacaaacccaatctgccaaacccaggttcatatagcccaggatcaacataccaacca
ggtcaagtgaatccagctgacaaacccaatcagccaaacccaggttcatatagcccagga
tcaacataccagccaaatcccaaagggacagcttcaaatcctgatcagccttccttccag
caacagccaccaaatggacagcccctattccaaccaaacactcagaatggagagaaacca
gtgagtgcctaccagcctggacaacctgatactaacagttatcagccagttccagcccca
atcggtctgccacgtcccgcatcgacttgtggaaaaagactcaaggagacgcacaacgca
tcaccgggagacgccggtttcgctgagtttccttggcaagcgttggtgagctcagcctca
aacaaatcctatgtttgtagcgcggcaataattgctgataatgcggtcatcacggcagct
cattgtgttgaagggttaagatcaaaggacatagcaatcgaagcgggtgtatataagttg
ctgtccctctatgagaatccgattcggaggcgaccagcagcggcggtggcgcgtcacccc
cacttcagcatcgaaaacctctccaacgatctggccatcattgtcgtgacgcaaaccttc
aattttgacgaccatatcagcaagatatgcttgccgtcaacttccaaacccaaatacgac
cagtccagcaactgtgtagtgactggatggggacgcaaacagctcaagggttcgattcca
gaaagtgtgttacacaaagttgatgtgaaatttataccagaagatgtgtgcgaatcgaaa
ttgagatctactaatctgggcaaatacttcattctgaacaaaggattttcatgtgcttta
ccaaagaatccctcagatttatgcaaggtggacgtaggaagccctatcgcgtgcgagcgt
ggggatggtcattacgagctggccggggtgaacagctgggatgtgggctgccagaccgac
cagacccccaccatcacatccaacccggacgcagagtggatcgacaaggtcattaacacc
cctgccgagcagctggctatccaagaggagaaatacttcgccgataaactcaagggagag
tccattgatgatgttgacatcgaccagaagcctggatttgcgctcggctatggaaagtag
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