Nilaparvata lugens (brown planthopper): 111056257
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Entry
111056257 CDS
T07276
Name
(RefSeq) protein suppressor of forked isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111056257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111056257
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111056257
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
111056257
NCBI-ProteinID:
XP_022199293
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Position
10:complement(30268967..30299879)
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AA seq
732 aa
AA seq
DB search
MTTTTTEEKTEVDWGSEKLNKAQEAIKENQWDLEAWSMLIREAQTKWINDVRPFFEQLVT
AFPSTGRYWKLYIEQEMKGRNFERVEKLFQRCLMKVLNIDLWKLYLAYVKETKAALPTYK
EKMAQAYDFALEKIGMDIQSYSIWNDYVQFLQSVEAIGSYAENQKISAVRKVYQRGVVNP
MVNIEALWKDYMAFEQGINPIIAEKMSMERSRYYMNARRVAKEFEAVTRGLNKNIPSVPP
TGHMDELKQVDLWKKYIMWEKSNPLRSEDTALVTRRVMFAFEQCLLCVGHHPDIWFEAAQ
FLEQSSKILVEKADVNSAKLFSDEAANVFERATSSTLKHSMLLYFAYADFEEGRMKYDKV
HQIYAKFLDIQEIDPTLAYIQYMKFARRAEGIKSARNVFKKAREDSRSKFHIFVSAALME
YYCSKDKNIAFRIFELGLKKFSDSPQYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLEPE
KSVEIWNKFLEFESNIGDLTSIVKVEKRRSAVLGKIAEFEGKETAQLVDRYKFLDLYPCS
AAELRSIGYNEVTATVKQHTMAAMMGSGGPSRGFLDSCLDDHLETQSSNLPRPDTTQMIP
YKPKSNAYLGEHTVPGGAFPFPPAAAHLCTLLPPPHCFLGPFVGVDALIDVFSKILLPDT
APLPTTDNGCDTKLFDLAKSVHWVVDSEEGGKRKRRLNGGVGGGGEDSDDDEMMGAPPAN
DIYRQRQQKRVK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacgactactactactgaagaaaaaacggaagtggactggggaagtgagaagctgaac
aaagcgcaggaagcaatcaaagagaaccaatgggacctggaggcgtggagcatgctgata
agggaggcgcaaaccaagtggataaacgatgtgcgccctttcttcgagcaactggtcacc
gcgttcccgtcaaccggacgctattggaaattgtatattgaacaggagatgaaaggaaga
aattttgaaagagtcgaaaagttatttcaacgatgcctcatgaaagttctcaatatcgat
ctgtggaaactttatcttgcctatgtgaaggagaccaaggctgcgttacccacctacaag
gaaaaaatggcgcaggcctacgatttcgccctggaaaagatcggaatggacatccaatcg
tactcgatttggaacgattacgtgcagttccttcagagtgtcgaagccatcggatcatac
gccgagaatcagaaaataagtgctgtccgaaaggtgtatcaaagaggagtggtgaatccg
atggtgaacatagaagcgttgtggaaggattacatggcgttcgagcagggcatcaatccg
atcatagccgagaagatgagtatggagaggagtcgctactacatgaacgccagacgggtg
gccaaggagttcgaggctgtcaccaggggactcaacaagaatatacccagtgtacctcct
actggccatatggatgagttgaaacaggttgacttgtggaaaaagtacataatgtgggag
aagtcgaatccgcttcgcagcgaggacactgcgctggtgacgcgacgcgtgatgtttgcc
ttcgagcaatgcctgctctgcgtcggacatcaccccgacatctggttcgaggccgcacag
ttcctagagcagagctccaagattctcgtcgagaaggcggatgtaaactcggcgaaactg
ttcagcgacgaggcagcgaacgtgtttgagcgagccacttcgtcgactctgaagcacagc
atgctgctctacttcgcctacgccgacttcgaggaaggccgcatgaagtacgacaaagtg
catcagatctacgccaagttcctcgacattcaggaaatcgatcctactctggcttacatc
cagtacatgaagtttgcaagacgagcagaaggaatcaagtccgcgcgaaatgtattcaaa
aaagcacgagaggattcaagatcgaaatttcatatattcgtatcagctgctctgatggaa
tactattgtagtaaggacaaaaacatagcatttaggatattcgaattgggattgaaaaag
ttctctgacagtccgcaatatgttctctgttatatcgactacttatcacatttgaacgag
gacaataataccagagtactgtttgaaagggttttatcttcaggaagtttagaaccagaa
aaatcggttgaaatctggaacaaattccttgaattcgaatcaaacattggagatctaacc
agtattgtaaaagttgagaaaaggcggagtgctgtcttgggaaagatagctgagttcgag
ggaaaagagactgcacaattagttgatcgttacaaattccttgatctatatccttgttct
gcggctgaactcaggtcaatagggtacaacgaagtgacggctactgtgaaacagcacaca
atggcggcgatgatggggtcaggggggccatcacgcggcttcctcgacagctgcctcgac
gaccacctggagacacagagcagcaatctgccgcgacccgacaccacgcagatgatcccc
tacaagcccaaatccaatgcctacttgggcgagcacactgtgccaggaggggccttcccc
tttcctcccgccgccgctcacctctgcacactgctgccgcctccgcactgcttcctgggg
ccctttgtcggcgtcgatgcgctcattgacgtcttcagcaagatactcttgcctgatacc
gcacctctgcctacgacggacaacggctgcgacacgaagctgttcgacctggcgaagtcg
gtgcactgggtggtggacagcgaggagggggggaagcgcaagcgccggctgaacggcggc
gtgggagggggaggggaggacagtgatgatgacgagatgatgggagcgccgcccgccaac
gacatctacaggcagcgacagcagaagcgggtcaagtga
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