Nilaparvata lugens (brown planthopper): 111057148
Help
Entry
111057148 CDS
T07276
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111057148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111057148
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111057148
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111057148
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111057148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCHC
zf-CCCH_2
Nab2-like_zf-CCCH_
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
111057148
NCBI-ProteinID:
XP_022200280
LinkDB
All DBs
Position
3:31709526..31720765
Genome browser
AA seq
341 aa
AA seq
DB search
MEFIVASVENIKFDIEVALEQQIGSLPLPFPRMDKSIAAVCEFFPSGSCMKGTMCPLRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESK
IKDCPWYDRGFCRHGPNCRHRHVRRVLCMNYLAGFCPDGPECKFVHPRFELPATDVNAKD
GKKVLLTCHFCGETGHKAMYCHKMPFEMREAEAKLAAKSLPPTAGGMNGIGSSGSLNTTS
AVPVTGQSENKEDNKMSDDSKTQTTPQPQQNPGKPPLKPLEEVTCFKCGYKGHYANKCPK
GHLAFLALSNAGVHPNQQQQQQHQQAILNFQQLNNINNFKR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagtttattgtagctagtgtagaaaatataaaatttgatatagaagtagctcttgag
caacaaataggatctttgccgttgccgtttcctcgaatggataagtcaattgctgcagtt
tgcgaattctttccgagtggatcatgcatgaaaggcacgatgtgtccgttgcgacatgtc
cgtggcgacaggacaatagtgtgcaagcattggcttcgcggcctctgcaaaaagggtgac
cagtgcgagtttctacacgagtatgacatgactaaaatgcctgaatgctacttctattca
cgattcaatgcgtgccacaacaaggaatgtccttttcttcacattgatccggagagcaag
atcaaagattgtccttggtatgaccgaggcttctgtagacatggtccgaattgtcggcat
agacacgtcagacgagttctttgcatgaattatctagctgggttttgtcctgatggtccc
gaatgtaaatttgtacatccacgttttgaacttcctgctactgacgtaaacgctaaagat
ggcaaaaaggttcttctaacttgccacttctgtggtgaaactggtcataaggctatgtat
tgtcataaaatgccatttgaaatgagagaagcagaagccaaattggcggccaaatctctt
ccacccaccgctggaggaatgaacggcattggaagctccggctcactcaacactacgtct
gctgttccggtgactggccagtcggaaaataaagaagacaataaaatgtccgatgacagc
aaaactcaaactacaccgcagccgcaacaaaatcctggcaagccgcctttgaaaccgctc
gaagaagtcacgtgtttcaagtgtggttacaaagggcactacgccaacaaatgtccgaag
ggccatcttgctttcttggcactgagtaacgctggagtgcatcccaaccagcagcagcaa
cagcagcatcaacaagcaatactcaacttccagcagctcaataatatcaacaatttcaaa
aggtga
DBGET
integrated database retrieval system
