Nilaparvata lugens (brown planthopper): 111057977
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Entry
111057977 CDS
T07276
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111057977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111057977
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111057977
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111057977
NCBI-ProteinID:
XP_039295987
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Position
13:20589135..20620566
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AA seq
498 aa
AA seq
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MADEDLSEDQWLYGDSNPDKSKDGVAETDLFGDKTLPNSDLAPPGVLEPPGILEPPIIKP
PQITSYTEEPSKPDENDILPPGVTDENGDKDGDNEEGDEDAEKNKEEGEIGNADGEGEGE
EGEKEKTGEGEDDEDEDSDEDNINIVIGEIKTTSQYSIRKGGLLTAAPPPQTKQTGKFSI
EEFESIGSINGVPAQEFNLETLEEKPWRKPGADITDYFNYGFNEDTWRAYCERQKRIRVH
ESGAGLGPLGVPQAVNSSGGSNRANIPLSTVNDSSKYGGKPGGGAMPPGPPGIPRPTNEG
NAIQVMTADRREYSRKGFPDMMGGPIPIPPPGFAHAFPPPGYPPPVQPPEYYNSEMDPYY
QAYEPTQDSQWMNNSWGQDPKALPRPPGTSDISNIDSQDDRSNLTGGLVIKQEKDRDRAV
SRDRDRDRDRDRDRERERERDRDRERYRERERSHRHRSRSRSQERKSRKHKSRSRSPGHR
SHKKKKAKKSDRAKDESD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagatttaagtgaagatcagtggctttatggagattcaaatccagataaa
tctaaagatggtgtagctgaaactgatcttttcggcgataaaaccctacccaattcagac
ttggctccacctggagttttagaacctccgggtattctagagcctccaattatcaaacca
ccccaaatcacatcttacacggaagaacctagcaaacctgatgaaaatgatattctacct
ccaggtgtgacggatgaaaatggagacaaagatggcgataatgaagagggagacgaagac
gcagagaagaacaaggaagagggagaaattggcaacgccgacggcgaaggagaaggggaa
gaaggagaaaaggagaagacaggagaaggagaggatgatgaagacgaggacagcgatgag
gataatattaatattgtgatcggcgagattaagacgacatcgcagtacagcatcaggaaa
ggcgggttgcttactgcggctcctccaccgcagactaagcaaactggaaagttttctatt
gaagagttcgaatcgattggatcgattaatggagtgccggctcaagagttcaatcttgaa
acactcgaagagaaaccatggagaaagcctggtgcagatattacagattacttcaactat
ggttttaatgaggatacgtggcgagcttactgtgaacgacagaagcggatcagagtgcat
gagtccggagctggtctaggacctctaggcgttcctcaggcagtgaactcttcaggaggt
tctaaccgcgctaacattccgttgtcaactgtcaacgacagttcgaaatacgggggcaaa
ccagggggcggagcaatgccccctggccccccaggcataccacgacctaccaacgagggc
aacgctatacaggtgatgacagctgataggcgtgagtatagtaggaaaggattcccagat
atgatgggcggtcctattcctataccacctcctggttttgcgcatgcattcccgccacct
ggctacccaccccccgtgcagccgcccgaatactacaacagcgagatggacccctactac
caggcttatgagccgacgcaggactcgcagtggatgaacaactcatggggtcaggacccc
aaggcactgccgcgtccacctggcaccagcgatatctctaatatcgattcacaggatgac
agatcgaacctgactggaggactggtgattaaacaggagaaggacagagacagggcggtg
agtcgagacagagacagagatcgcgaccgcgacagagacagggagagggagcgagagaga
gaccgcgacagggagagataccgcgagagagaacgatctcatcgtcacagatcacgaagt
cgatctcaggagcgcaagtcacgaaagcacaagtcacgcagtcgcagtcctggtcatcgc
agtcacaagaagaagaaggccaagaagtcagacagggccaaagatgagagtgactaa
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