Nilaparvata lugens (brown planthopper): 111058491
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Entry
111058491 CDS
T07276
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111058491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlu03041
]
111058491
Spliceosome [BR:
nlu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111058491
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_SCAP
Beta-prop_SPT8
WD40_like
WD_LRWD1
Beta-prop_IFT140_1st
Nbas_N
Pectate_lyase22
Motif
Other DBs
NCBI-GeneID:
111058491
NCBI-ProteinID:
XP_022201719
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Position
4:complement(46823125..46858725)
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AA seq
517 aa
AA seq
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MSDDEEVLYVKKQKTIHYGSLEEQERQRLAAIAASGGSQLEESSNSPGSPAGDASGMPGN
VHTHDEYMELEDEISRDKQALLEEFERRKKARQVNVSTDDSEVKRNLRQLGEPICLFGEG
PAERRSRLRELLSRLGEDAIQRKQEEEEERLQQEKDQETTWYHEGPESLKDARLWIANYS
LPRAKKRLEAARQEVQLAEATLTARRQELQKHLTGLSIYCSQIGDTRPLSYCNFSPDSKM
LATASWSGLCKLWSIPNCELLKTFKGHNCNVGCITFNPLALSDQESICALASCAVDGSVK
LWTLNSEEPLADVEGHAPNRVSRIAFHPSGRFLGTCCFDSSWRLWDLAVGQEVLHQEGHT
KPVYCLSFQQDGALAASGGLDSFGRVWDLRTGRCIMFLEGHLKSIYGIDFSPDGYHIATG
SEDNACRVWDLRRRNCVYTIPAHMNLISDIKYQRSGGHFLITSSYDNTAKVWSSKTWQPL
KTLSGHDGKVMGLDISPDSKFIATCSYDRTFKLWAPE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaagaagtgctgtatgtgaagaaacaaaaaacgattcattatggctcg
cttgaagaacaagagagacagcgcctggcagccattgctgcttccggcggttctcagttg
gaagagagcagcaacagtcctggcagtcccgctggtgatgcctctggcatgcctggaaat
gtgcacacccatgacgagtatatggaattggaggatgaaatatcacgggataagcaagct
cttctagaggagttcgagaggcggaaaaaagcgaggcaggtgaatgtttcgacagatgac
tctgaggtcaagaggaatctacgtcaacttggagaacccatctgcttgtttggggaaggg
ccagccgaacgccgaagtaggctcagggagctactttccaggttaggagaggatgctatc
caaaggaagcaggaagaagaggaagagagactacaacaagagaaagatcaggagaccact
tggtatcacgaaggtcccgaatcgctcaaagatgcccgtttgtggattgctaattactcg
ttaccacgagccaagaagaggctggaggctgctcgtcaggaggtgcaactggctgaggcc
accctcaccgctcgaaggcaggagctgcaaaagcatctgaccggcctctccatctactgc
agtcagattggagacacgcggccgctgtcctattgcaacttcagccccgattcaaagatg
ctcgccactgcctcctggagtggcctatgcaaactgtggtcgatccccaattgtgagctg
ctgaaaacgttcaagggtcacaactgcaatgtgggttgcatcacgttcaacccgcttgca
ctcagtgaccaggagtccatctgcgccctcgcctcttgcgccgttgatggctctgtcaag
ctatggacactcaacagcgaagagccgctggcggacgtggaagggcacgcaccgaaccga
gtaagtcggatcgcattccacccgagcggtcgcttcctgggcacctgctgcttcgactcg
tcctggcgcctgtgggacctggccgtcggtcaggaggtcctccatcaggaaggccacacc
aagcccgtctactgtctctcctttcaacaggacggcgcgctcgctgcttctggagggctg
gattcgttcggacgagtttgggacttgagaacaggccgctgcattatgttcttggaagga
catttgaagtccatttatggcattgacttctcgccagatggatatcacattgccactggc
agcgaagacaatgcgtgccgagtttgggatctgcggcgaagaaattgcgtctacacaatt
ccagctcacatgaatctcatctctgatataaagtaccagcgatctggcggccacttcctc
attacctcatcctacgacaacactgccaaggtgtggtcaagtaaaacgtggcagccattg
aagactctgtccggacatgatgggaaagtgatgggacttgatatttctcctgattcaaag
ttcattgccacatgctcctatgatagaactttcaaattgtgggctccggagtga
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