Nilaparvata lugens (brown planthopper): 111059339
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Entry
111059339 CDS
T07276
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111059339
09123 Folding, sorting and degradation
03018 RNA degradation
111059339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111059339
03041 Spliceosome [BR:
nlu03041
]
111059339
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111059339
mRNA degradation factors
5'-3' decay
Lsm complex
111059339
Spliceosome [BR:
nlu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111059339
Complex C
U2 snRNP components
111059339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
111059339
NCBI-ProteinID:
XP_022202676
LinkDB
All DBs
Position
6:6140171..6149730
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMAATR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttactctttcttcaaatcgctcgtcggcaaggacgtagtcgttgagttgaag
aatgatcttagtatttgtggcactcttcattcagtggatcaatatctaaatataaaacta
accgacatcagcgtgacagatcctgacaaataccctcacatgttatcagtgaagaattgt
ttcattcgaggatcagtggttcggtacgtccagctacccgccgatgaggtggacacacaa
ctgctacaggatgcggccagaaaagaagcaatggccgccaccagatag
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