Nilaparvata lugens (brown planthopper): 111060626
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Entry
111060626 CDS
T07276
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111060626
09123 Folding, sorting and degradation
03018 RNA degradation
111060626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111060626
03041 Spliceosome [BR:
nlu03041
]
111060626
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111060626
mRNA degradation factors
5'-3' decay
Lsm complex
111060626
Spliceosome [BR:
nlu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111060626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111060626
NCBI-ProteinID:
XP_039279840
LinkDB
All DBs
Position
3:complement(47481304..47516710)
Genome browser
AA seq
137 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDMVMKNRGRGEMKGRGGQNQRGRGGGRGTFGGRGGRPAP
LGRGRNPPNKPKGVKGP
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttgtcattacttcgcacggctcagaaccatccaatgttggtggagctgaaa
aatggagaaacatataacggacatttagttagctgtgataactggatgaatatcaatctg
agagaagttatttgcacatcaagagatggtgacaagttttggaggatgcccgaatgctat
attagaggaagcacaatcaaatacctcaggatacctgatgaagtgatagatatggtgaaa
gaagatatggtgatgaagaatagaggtcgtggagagatgaagggtagaggaggacagaac
cagaggggtcgagggggtggccgaggaacattcggtggccgcggaggtcgaccagctcct
ctgggacgtgggcgaaatccacccaacaagccaaaaggagtcaaaggaccttga
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