Nilaparvata lugens (brown planthopper): 111062178
Help
Entry
111062178 CDS
T07276
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111062178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlu03041
]
111062178
Spliceosome [BR:
nlu03041
]
Complex C
Other components
Step II factors
111062178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
PQQ_2
Beta-prop_NOL10_N
Beta-prop_LRRK2
DUF2458
Motif
Other DBs
NCBI-GeneID:
111062178
NCBI-ProteinID:
XP_039278533
LinkDB
All DBs
Position
1:complement(23277535..23294188)
Genome browser
AA seq
573 aa
AA seq
DB search
MLQLQQYGSDSGGDSDSGSGDEKLAHLKPIEGSAKIMESLQKNYAVCAAPDVVPTKPVEP
LSYMDVGTKELTRNLKYEELFAPDVGPENPFLTQQQRAQKNMLAGFVEKAHMSDFQFENQ
RRTFTSYGYALDPTVDSNTIEGTSVVGAASAAEEGDGKTVFESSKKRPLDKRKRNKNDNP
EDIEGFLGPWGCYVDEKRTVKPNEEEAEELEEYLAKKQKRGKQMDDKPVEEKTVLHIKDP
TDYQGRSFLFAPQDVGVNLKSDSPPDRCFLPKAQIHTWQGHTKGISAIRWFPGTAHLLLS
CSIDYRVKLWEVYGERRCIRTYYGHRQAVRDICFNNPGKQFLSAAYDRFIKLWDTETGEC
ISRFTSRKIPYCVKFHPDEDKQNLFVAGTSDKKIICWDTRSGEIVQEYDRHLGAVNSITF
VDENRRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTLSPNQKWLACQSMDNKIV
IFSALNRFKLNRKKTFTGHMVAGYACSLDFSPDMSYIVSGDADGKCYVWDWKTTKLFKKW
KAHDAVCIGVLWHPHEPSKLVTAGWDGLIKYWD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagttgcagcagtacggaagtgatagtggtggagactcagactcaggtagtggt
gatgaaaaacttgctcatctcaaacccattgaaggatcagcaaaaataatggaaagttta
cagaaaaactatgcagtatgtgctgcgccagacgtggttcccactaaacccgtggaaccg
ctgagctacatggatgttggcaccaaagagctgactcgcaatttgaagtatgaagagctt
tttgcgcccgatgtgggacccgagaatccgtttcttactcagcagcagcgcgctcagaag
aatatgctggcaggtttcgtagagaaagcgcacatgagtgattttcaatttgaaaaccag
agaagaacgtttaccagttatggctatgcattagatccgacagtagactcgaatacaata
gaaggcactagtgttgttggagctgcatcagcagcagaagaaggcgatggaaaaacagta
tttgaatcttctaagaaaaggccacttgataagagaaaaagaaacaaaaatgataatcct
gaagatattgaaggttttttgggtccttggggttgttatgtggacgagaaaagaacagtt
aaaccaaacgaagaggaagctgaagagcttgaagaatatttggccaagaaacaaaagcga
gggaaacaaatggatgacaaacctgtcgaagagaagactgttttacacatcaaggatccc
accgactaccaaggaagatcattcctgtttgctcctcaagatgtgggcgtgaacttgaaa
tcagactcgccacccgatcgctgtttcttgccaaaggctcagatacacacttggcagggg
cacaccaaaggcatatcggccattcgctggttcccaggcaccgcccaccttctgctctcc
tgcagcatagactatcgtgtcaagttatgggaagtttatggcgaaagaagatgtattcgt
acctattacggacacagacaagcagttcgagatatttgcttcaacaatcctggcaaacaa
tttttgtcggctgcatatgatcggttcataaagctttgggacacggagacaggtgaatgc
atatcacgcttcactagtcgcaaaattccatattgtgtcaaatttcatccggatgaagat
aagcagaatctgtttgttgctggaacatcggacaagaaaatcatttgttgggatacaaga
agcggtgagattgtacaagagtatgaccgccatcttggtgcagtcaattcgatcacattc
gtcgacgagaacaggcgattcgtcacgacatccgatgacaagagtttacgtgtatgggaa
tgggatattccggtggacatgaagtatatagctgaccccagcatgcattctatgcctgct
gtgactctttctccaaaccagaaatggctggcttgtcaaagcatggacaacaaaatcgtc
attttctcagcattgaacaggttcaagctgaatcggaagaaaacattcaccgggcacatg
gtggccggctatgcttgctctctcgacttttcacccgacatgagttacattgtgtcgggg
gatgctgatggaaaatgctacgtttgggactggaagacgacaaagctgttcaagaaatgg
aaagcacatgacgctgtgtgcattggagtgctgtggcatcctcacgaaccgagcaaactt
gtcacagccggctgggatggcttaatcaagtattgggactaa
DBGET
integrated database retrieval system