Nilaparvata lugens (brown planthopper): 111063192
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Entry
111063192 CDS
T07276
Name
(RefSeq) endoribonuclease ZC3H12A isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111063192
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111063192
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
RuvA_C
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111063192
NCBI-ProteinID:
XP_039296078
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Position
1:66355226..66399257
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AA seq
717 aa
AA seq
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MDELKHSYNVVHVERRKASKVFENLDKICELFSVSLHEISGKNEQFVAFNVELKSKNDAV
TLDPVFVNKIQNYVDQVYSSGGSGKMAVGGGAETEVEGEDSSYDSDADLDSGGGRHDDVS
RTTSDTLAAEYADYVSSAALPQAQPHPAANYTAKVEFALKLGYTERQVQAALQKLGPNPG
QNELLAELIKLGAQTLGPRLGGSESDLGCSLMNAADDSLSDSLASMQSEHPSITAISGEP
HAEQLRLRPVVIDGSNVAKSHGNKEVFSCRGIKLCVDWFRSRGHKEITVFVPKWRKESSR
PDNPITDQEILNELERDRLLVFTPSRLLGGKRTVCYDDRYILRLAAENDGIVVSNDNYRD
LAQESPEFRKVVEERILMYSFVNDRFMPPDDPLGRSGPTLDNFLRFQPHPPPPCPYGKKC
TYGNKCKFHHPERGPLPHKSVTERLVEHAQRQLQARGRDQSPANQIKGKSLSLPLSGAGP
GANTGPVGAAQDCAEVRKTPLSRTKSNVVVGEGGGGLDTYRSPPPGYPMYATTAGGAAPW
MHAAQPQSAARGDGLHRKLQRQLTLNPVCDPRLYQMQRYMSQHEQPHVAAPPPHPNVTRI
ASAPPAHPSHGPHPAAHAPWHEAPVLSSASDPQLNLSAPPPPLAWSVPPPQLPPHHPPPP
PPAAPEEARRRLHYHLASLFPEEQVHTVLQLYPNETNPQKICAAILAMFPTTNQPLG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattgaaacacagttataatgtcgtacatgttgaacgaagaaaagcttcaaaa
gtgtttgaaaatttagacaaaatatgcgagctattttctgttagtcttcatgagatatcg
ggtaaaaatgaacaatttgtagcgtttaatgtggagttaaaatcaaaaaatgatgcagtt
accctagatccagtttttgtgaacaaaatccagaactatgtggaccaggtttacagtagc
ggtggcagcggcaagatggcggtcggagggggggcggagacggaggtggagggtgaggac
tcgagctacgactctgatgccgatctcgactccgggggcggacgccacgacgacgtcagc
cggacgacgtcggacactctcgccgcagagtacgccgactacgtgtcgagtgctgccctg
ccgcaggcccagccgcaccccgccgccaactacaccgccaaggtcgagtttgcgctcaag
ctcggctacaccgaacgccaggtccaggccgccctgcagaagctcggtcccaacccggga
cagaatgagctgctcgctgagcttatcaaactaggagcacagacattgggccctcgtctc
ggaggatcggagagcgatctaggatgctcacttatgaacgctgcggatgacagtctcagc
gacagtctggcatccatgcaatccgagcatccctccataaccgctatctctggtgaacct
catgcagagcaattgagactccggcctgtagtcatagatggcagcaacgtagccaaaagc
catggtaacaaggaagtattctcatgtcgaggaattaaactgtgtgtcgattggttcaga
tctagaggacataaagagatcaccgtatttgtgccaaagtggaggaaagaatcttcacgc
cctgacaaccccattacagatcaggaaattttaaacgaactggaaagagacagactgctg
gttttcacaccgtcgcggctacttggtggaaagaggacggtctgctacgatgatcgctac
atactgaggttggcggccgaaaatgatggcatcgttgtatcaaatgacaattatagggac
cttgcccaggagagtcctgagttcaggaaagtcgttgaggaaagaattcttatgtactca
tttgtcaacgatcgattcatgccgccggatgatccgttgggccgctctggtccaacacta
gacaacttcctgcgtttccaacctcatcctccgccgccatgtccctatggcaagaagtgt
acctacggtaacaaatgcaaattccaccatccggaaagaggacctctgcctcataagtct
gtcaccgaacgtctcgtggaacatgctcagaggcagttgcaagcaagaggccgagatcag
agtccagcaaaccaaataaaaggtaaatcgttgagtttgccgttgtcgggcgctgggcca
ggtgcaaacacagggccggtgggtgcagcgcaggattgtgccgaggtgcggaaaacaccg
ctgtccagaacaaagtcgaacgtagtggtgggtgaaggaggcggtgggctggacacgtac
aggagtccgccaccgggctacccgatgtacgcgaccacggctggcggagcggcgccctgg
atgcacgcagcgcagccgcagtcggcggccaggggagacggcctacaccgcaagctgcag
cggcagctaacactaaaccctgtctgtgacccgaggctctaccagatgcagcgctacatg
tcacagcacgagcaaccccatgttgcggctccgcccccccaccctaatgtcacgcgcatc
gcatcggcgccccctgcgcacccctcccacggcccccaccccgccgcgcacgccccctgg
cacgaggcccccgttctgtcttccgcctccgaccctcagctcaacttgtccgcccctccg
ccacccctcgcctggtccgtgccgcctccccaactccctcctcaccatccgccccctcca
cctcccgccgctcccgaggaggcccgtcgccgcctccactaccacctcgcctctctcttc
cccgaggagcaggtacacaccgtactgcagctctaccccaacgaaaccaatcctcagaag
atatgcgccgccattctagccatgttccccaccaccaatcagcctctcggttga
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