Nilaparvata lugens (brown planthopper): 111064441
Help
Entry
111064441 CDS
T07276
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111064441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlu03400
]
111064441
DNA repair and recombination proteins [BR:
nlu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111064441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF3800
Peptidase_M16_C
UPF0184
AcaB
Motif
Other DBs
NCBI-GeneID:
111064441
NCBI-ProteinID:
XP_039289309
LinkDB
All DBs
Position
7:complement(63417861..63460612)
Genome browser
AA seq
924 aa
AA seq
DB search
MSKPTQQLALDANQHRQFVQYFNSLPEKPPTTIRFFHRIDFYTVHGQDAKFAAKEVFKTS
SFVKNGGSGDMQLDYLVLNKSQFETFVKDLLLVKRYRVEVYVNKKTRSDPLWVLEFKGSP
GNLSQFEDMLFANSDQVESPAVLAVRLTTNAKNKIIGLASVDIPAHTMSLCEFPDDEHFS
NLEAMVVQIGPKEVLIPAETSLEADKIKMIMERSGALVTVCKKNDFSTDNLVQDMNKLIL
FKEGQQQNANALSQMNLTTATGALAALVKYLELCSDQENLGQFAMVTLDQARYVYLDTAA
VNALNLLPTPGALAHRKNHSVLGLLDKCCTPQGHRLLSQWVKQPLKDLAAINERLDVVEC
LLDDMELRQSLLEDHLRRIPDLHALAKRIQRKKATMQDCYRIYQAMQRLPHLLAALKNQN
GGHAHSTLRSVLIEPLDELIGDMSNFQEMIETTLDMDYVDRGEFLIKPEFDEDLQEVREK
MNDLEEKIKSQLNKAARDLSLDPHKTIKLESNSQYGYFFRVSLKEEKVLRGQTTYTVLDS
VKNGVKFRSQKLTNLNEEYSQLREQYTEMQKKVVGEVITVAVSYATPLLQLSDVLAWLDV
VTSFAAVSAGAPGPYVRPKMSAPSEGVAPVMRLKQCRHPCLEMLTNTTFIPNDIEMEGGK
CTFLMVTGPNMGGKSTYIRSAGVAALLAHIGCFVPCDEAEMTVLDAILARVGASDSQIKG
MSTFMVEMVETASILRMATPNSLVIIDELGRGTSTYEGCGIAWAIAEYLAKEVGAFSLFA
THFHELTRLPELVPTVHNCHVTAVTSDDDNSLTLLYEVRPGACDQSFGIHCAKMARFPNQ
VIEDAKQKLADLEDYQGAITVCDSATKRKIIKEGEEMISEFLRECKKLKTDGISDEELEK
AISKLKDEIAKKNNPYVSALGATA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccaacccaacaattagctctagacgcaaaccagcacaggcagtttgttcag
tacttcaattctctaccagagaaaccaccgactacgatccgctttttccatcgaattgat
ttctacacagttcacggacaagatgctaagttcgccgctaaagaagttttcaaaacgtct
tcatttgtcaagaatggaggatcaggtgatatgcaactggattacctagtactcaataaa
tctcagtttgagactttcgtcaaagatcttcttctggtcaaacgttatcgtgtggaggtc
tatgttaacaaaaaaactaggagcgatccgctatgggttctcgaattcaagggttcaccc
ggtaatctatcgcagtttgaagatatgcttttcgcaaattcagatcaagttgaaagtccg
gccgttcttgcagtcaggttaaccacaaacgctaaaaacaaaataattggtctagcatca
gtggacattccggctcatacaatgtcgttgtgtgaatttcctgatgacgaacatttcagc
aatctggaagcgatggtcgttcaaattggtcccaaagaagttctcattccggctgaaacc
tccttggaagctgacaagatcaaaatgataatggaacgttctggtgccctagtgaccgtt
tgcaagaagaacgacttttcgaccgataatttggtgcaagacatgaacaagttaatttta
tttaaggaaggccagcaacagaatgccaatgctctgtcccagatgaatctaaccaccgct
actggagctctagctgctctcgtcaaatatctcgagttgtgttcggaccaagagaacctg
ggtcagtttgcgatggtgaccctggatcaggcccgttacgtgtatctggacacggcggcc
gtgaatgctctgaacctcctgcccacacctggggcattggcccatcgtaagaaccacagt
gtgctcggactattggacaagtgttgcacgcctcaaggtcacagattgttgtcacaatgg
gtgaaacagccgctgaaagacttggcggccatcaatgagcgcctagacgtagtggagtgt
ctactggacgacatggagctgaggcagtctctgcttgaagaccatttgcgccgcattccc
gacctccacgcgctcgccaagcgcattcagcgcaagaaggccactatgcaggattgctac
agaatctatcaagcgatgcaacgcctgccgcacctgttggcagcgctgaagaatcaaaat
ggcggacatgcgcactccacgctgcgcagtgtgctgattgagccgctggatgagttgatc
ggtgatatgagcaacttccaggagatgatagaaaccacgctcgacatggactatgtggac
cggggcgagttccttatcaaaccggagttcgacgaggatcttcaagaggtgagggagaag
atgaacgatttggaggagaaaatcaagagtcaactgaataaagcagctcgagatttgagc
ttggatccccacaaaaccatcaaacttgagtccaattcgcagtatggatattttttcagg
gtttctctcaaggaagaaaaggttctcagaggccagaccacatacacagttctggattcg
gttaaaaatggcgtcaaattccgcagccagaaattgacaaatctgaatgaggaatactcg
caattgagggagcagtacactgaaatgcagaaaaaagttgttggtgaagttatcaccgtt
gcagtgtcctacgcaaccccccttctacagttgagcgacgtactggcatggttggacgta
gtgaccagttttgcagccgtgtcggctggcgccccaggcccctatgtgcgccccaaaatg
agcgccccctctgagggcgtcgcccctgtcatgcgtctcaagcagtgccggcatccttgt
ctcgagatgctcactaacaccaccttcattcctaatgatatcgagatggagggcggcaaa
tgcacattcctgatggtgacaggacccaacatgggcggtaagagcacctacattcgtagc
gcaggtgtggcagccctgttggcgcatattggttgctttgtgccgtgcgacgaggcagag
atgacagtgctcgacgccattttggcgcgagttggggcgagtgattcgcagatcaagggc
atgtccaccttcatggtagagatggttgagacggcttctattctcaggatggccacacca
aactcactagttattattgatgaattgggaagaggcacatccacttatgaaggctgtgga
attgcatgggctattgctgaatacctggcgaaagaagtgggcgcattctcgctgtttgcc
acccacttccacgagctgacacggctgcccgaactggtgccgactgtgcacaattgtcac
gtgactgcggtgacgtcagatgacgacaacagtctgacgctgctctacgaggtgcgtccg
ggcgcctgtgatcagagcttcggcatacattgcgccaagatggccaggtttcctaaccag
gtcatagaggatgcaaaacagaaactagctgacttggaagactaccaaggagctattact
gtctgtgactcagctaccaagagaaaaataattaaggaaggagaagagatgatcagtgaa
tttttgagggaatgcaagaaactgaaaacggatggaatttcagatgaagagctagagaag
gcgatttctaagctgaaggatgaaattgccaagaaaaataatccatatgtctccgctcta
ggagcaactgcataa
DBGET
integrated database retrieval system
