Nilaparvata lugens (brown planthopper): 111064442
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Entry
111064442 CDS
T07276
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111064442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlu03021
]
111064442
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111064442
Transcription machinery [BR:
nlu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111064442
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111064442
U7-dependent histone pre-mRNA processing factors
111064442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
111064442
NCBI-ProteinID:
XP_039276278
LinkDB
All DBs
Position
2:complement(3427717..3502737)
Genome browser
AA seq
689 aa
AA seq
DB search
MSAKRKPDSQVPVEESDQLLIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEANEIDLLLISHFHLDHCGALPWFLLKTSFRGRCFMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLEASMDKIETLNFHEEKDVGGVKFWAYHAGHVLGAAMFMIEIAGVK
VLYTGDFSRQEDRHLMAAEIPTIHPDVLITESTYGTHIHEKREDRETRFTSLVNDIVTRG
GRCLIPVFALGRAQELLLILDEYWSQHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
KRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVI
IAGYCVEGTLAKTILSEPEEIVTMSGQKLALKLSVDYISFSAHTDYQQTSEFIRLLKPPH
VVLVHGEQNEMSRLKAALQREYEDDPDTNMQLHNPRNTIAVQLYFRGEKTAKVMGALAVE
KPKPGHKVSGVILKKNFSYHMLAPSDLSKYTDMTMSQVMQQQSVHFSGSLNVLKHYLLQI
SGSVAAIDERKLQVFGCIDVVLENKMITLEWMATPVNDMYADSIITAILQAETVDPYCKI
LPVQTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKANIDLMNLEVVCEE
DETLQQMVQTAVARLHDSLAPPRVDPAAS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaagagaaaaccagattcccaagtacccgttgaagagagtgaccaactcttg
attagacctttaggtgctggtcaagaggtgggccgttcgtgtattatgctggaattcaaa
ggaaagaaaattatgctggattgtggcattcatcctggtttgtcgggaatggacgctctt
ccgttcgtagatttggtggaagcaaatgagattgaccttctactgatatcacacttccat
cttgatcattgcggcgccctgccatggtttctattgaagaccagtttcagaggcagatgt
ttcatgactcatgctacgaaagctatctataggtggctattgtctgactacatcaaagtc
agtaatattgcgacagagcaaatgctgtacacagagtcggatctggaggcgagcatggac
aaaattgagactttgaatttccacgaagagaaagacgtgggtggagtgaagttctgggcg
taccatgcgggacacgttctgggagcagccatgtttatgattgaaatcgccggggtcaag
gtgctgtacacaggcgatttctctagacaagaagataggcatttgatggctgctgaaatc
cccaccattcatcccgacgtactgatcacggaatcaacgtatggtacacacattcacgag
aagagggaagaccgagagacgaggttcacgagtttggtgaacgacattgtcaccagagga
ggacgttgtctgataccagtgtttgcccttggcagggcgcaggagcttctacttatcctt
gatgaatactggagtcaacatccggaacttcatgacataccgatctactatgcctcgtca
ctggccaagaagtgcatggctgtctatcagacctatgtcaacgccatgaacgacaaaatc
aaaagacaaatcgccatcaacaatccgtttgttttcaaacacatttctaatttgaaggga
atcgatcactttgaagacatcggaccttgcgtggtgatggcttctccaggaatgatgcag
agtggtctgtccagggagctgtttgaatcctggtgtacagacgctaaaaatggagtcatt
attgctggttactgcgtggagggaaccctagccaaaacaattctgtcggaaccggaagaa
atagtgacaatgtctggtcagaaattggcgttgaagttgtctgtggactacatatcgttc
tcggcgcacacggattaccaacagaccagcgagtttattcgtctcctcaaacctccacat
gttgtgctagtgcacggtgagcagaacgagatgagccgactgaaggccgccctgcagcgc
gagtacgaggatgatccggacaccaacatgcagctgcacaaccctcgcaacaccatcgcc
gttcagctctacttccgcggcgagaagactgccaaggtgatgggagcgcttgctgtggag
aagcctaaacctggccacaaagtgtctggtgtcatcttgaagaagaatttcagttatcac
atgctagctccaagcgatctctccaaatacacagacatgacaatgagccaagtgatgcaa
cagcaatcggtccacttctcaggctccctcaacgttctcaagcattacctgcttcagata
tcgggctctgtggcggcaatcgatgaaaggaaactgcaagtattcgggtgcatcgacgtt
gtactcgaaaataaaatgataacgctagagtggatggctactccagtcaacgacatgtac
gctgatagtattatcactgccattctgcaagcagagactgttgatccttattgcaaaata
ctccctgtacaaaccaagatggacaggatgcatttcaaggagtgtctaatagaaatgctg
caggaaatgtttggcgaggattcagttccgaaaattttcaaaggggagaagctgtacgtc
acagttgatggcaagaaggctaatattgatctcatgaaccttgaagtagtttgcgaggaa
gatgaaacactacagcaaatggttcaaacagcagttgcacgacttcacgactccctggcg
ccgcctcgtgtggaccctgccgcatcataa
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