Nilaparvata lugens (brown planthopper): 120351165
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Entry
120351165 CDS
T07276
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120351165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
120351165
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120351165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120351165
NCBI-ProteinID:
XP_039283371
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All DBs
Position
4:complement(38483048..38521534)
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AA seq
225 aa
AA seq
DB search
MAGLPGTSSGFVGLSESNPGQTQHKNLVKFLLISQLGTITSETVVVASIYGPADVRPQKQ
LSDRSYLEAIYRPNAGQSLVCDRERESFLKCTCESVVRTVTYPRTGVSVIVQKVQDFGGL
LACAINAVCLALLNSGIEMNCVICAVSAMVADDDQIIIDPDHIKLKASKGRMTFTFDNCE
NKIVNSYTEGTFTEAQYHEALLRCKLISGQIFKTFRNTVARYNHS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttaccaggaactagtagtggttttgttggcttatcagaatcgaacccagga
caaacacaacataaaaatttggtgaaattcctgctaatatctcaactagggactataaca
agtgaaacagttgtagttgccagtatctatggtccagcagacgtgagacctcaaaaacaa
ttgagtgatagatcgtaccttgaagcaatatacagaccaaacgcaggacagtctttggtt
tgtgaccgagaaagggaaagctttttgaaatgcacctgtgaatcagtggtgcggactgtg
acatatccaagaaccggtgtttctgtcatagttcaaaaagtacaggattttggtgggctt
ttggcctgcgccataaatgcggtatgtttggctctgctcaattctggaatcgaaatgaat
tgtgtgatttgtgcagtctctgctatggtggctgacgatgatcaaatcataatcgatcca
gatcacataaagctgaaggccagtaaaggacgaatgaccttcacgttcgataactgtgag
aataaaatagtcaattcctacacagagggaacgttcacagaagcccaataccatgaggcg
ttacttaggtgcaagttgattagtggtcaaatattcaaaacgttcagaaatactgttgcg
agatataatcattcctga
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